Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   MY487_RS08340 Genome accession   NZ_CP096033
Coordinates   1634030..1635298 (+) Length   422 a.a.
NCBI ID   WP_015417482.1    Uniprot ID   A7Z4S7
Organism   Bacillus amyloliquefaciens strain GL18     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1629030..1640298
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MY487_RS08315 (MY487_08315) pyrH 1629825..1630547 (+) 723 WP_003154213.1 UMP kinase -
  MY487_RS08320 (MY487_08320) frr 1630550..1631107 (+) 558 WP_003154212.1 ribosome recycling factor -
  MY487_RS08325 (MY487_08325) - 1631233..1632015 (+) 783 WP_007409795.1 isoprenyl transferase -
  MY487_RS08330 (MY487_08330) - 1632019..1632816 (+) 798 WP_007409796.1 phosphatidate cytidylyltransferase -
  MY487_RS08335 (MY487_08335) dxr 1632872..1634023 (+) 1152 WP_012117564.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  MY487_RS08340 (MY487_08340) eeP 1634030..1635298 (+) 1269 WP_015417482.1 RIP metalloprotease RseP Regulator
  MY487_RS08345 (MY487_08345) proS 1635330..1637024 (+) 1695 WP_007611460.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46515.44 Da        Isoelectric Point: 6.1739

>NTDB_id=585786 MY487_RS08340 WP_015417482.1 1634030..1635298(+) (eeP) [Bacillus amyloliquefaciens strain GL18]
MFVNTVIAFIIIFGTLVFFHELGHLLLAQRAGILCREFAIGFGPKIFSFKKNETVYTIRLLPVGGFVRMAGEDPEMIEVK
PGYTVGLLFNKDDEVEKVIINQKEKYPDALIIEVETADLEHEMKITGYEQGKEDELAGFTVSQTSFFIVDGEEVQIAPYN
RQFGSKPVWKRIKAIAAGPIMNFILAYVILVMLGFIQGVPSNQPELGKLTDNGRAAAAGLKEGDYIQSINGEKMMSWTDI
VTAVKENPGKKIDVAVKRDGKSFHISVTPEAVKDENKKTIGRFGSYAPTEKGALAAIAYGATSTVDVTKAILTNLSKLVT
GQFKLDMLSGPVGIYDMTDQVAKTGIINLFQFAAFLSINLGIVNLLPIPALDGGRLLFLFIEAIRGKPINRDKEAFVVFI
GVAFLMLLMLVVTWNDIQRLFL

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=585786 MY487_RS08340 WP_015417482.1 1634030..1635298(+) (eeP) [Bacillus amyloliquefaciens strain GL18]
ATGTTCGTGAATACAGTTATCGCGTTTATTATTATTTTCGGAACGCTCGTTTTTTTCCATGAGCTCGGGCATTTATTGCT
CGCCCAAAGAGCGGGAATCCTTTGCCGTGAATTTGCGATCGGCTTCGGCCCTAAAATCTTTTCATTTAAAAAGAATGAAA
CCGTGTATACGATCAGACTCCTTCCGGTCGGCGGGTTCGTCCGCATGGCCGGTGAAGACCCGGAGATGATCGAAGTCAAA
CCCGGTTATACCGTCGGGCTTCTTTTTAATAAAGATGACGAAGTGGAAAAAGTCATCATTAATCAAAAGGAAAAATATCC
CGACGCTTTAATTATTGAGGTGGAGACGGCTGATCTTGAGCACGAAATGAAGATTACCGGGTACGAGCAGGGGAAAGAAG
ATGAACTGGCGGGCTTTACTGTCAGTCAGACCTCCTTTTTTATCGTAGACGGAGAAGAAGTGCAGATTGCGCCTTACAAT
CGACAATTCGGGTCTAAACCCGTATGGAAGCGGATTAAGGCGATTGCTGCCGGTCCGATAATGAACTTCATCTTAGCGTA
TGTCATTCTCGTCATGCTCGGATTCATTCAAGGCGTGCCTTCGAATCAGCCTGAGCTCGGGAAGCTGACAGACAATGGAC
GCGCAGCGGCTGCCGGTTTAAAAGAAGGCGACTATATCCAGAGCATTAACGGTGAAAAAATGATGTCATGGACCGACATC
GTGACAGCGGTAAAAGAAAATCCCGGAAAAAAAATCGATGTCGCCGTCAAACGGGACGGCAAATCGTTTCATATCTCGGT
TACACCTGAAGCTGTAAAAGATGAAAATAAAAAAACAATCGGCCGCTTCGGCTCTTATGCGCCGACTGAAAAAGGCGCGC
TTGCAGCGATTGCCTATGGCGCGACATCTACCGTTGATGTCACAAAAGCGATTCTGACCAATCTGAGCAAACTTGTGACA
GGCCAGTTTAAGCTTGATATGCTTTCGGGTCCTGTCGGCATTTATGATATGACGGATCAAGTTGCAAAAACCGGTATTAT
CAACCTATTCCAGTTTGCGGCGTTTTTAAGCATCAACCTGGGAATTGTCAACCTGCTGCCGATACCGGCGCTTGACGGCG
GGCGGCTGCTGTTTTTATTCATTGAAGCAATCCGCGGCAAGCCGATAAACCGTGACAAGGAAGCATTTGTCGTATTTATC
GGCGTAGCTTTCTTAATGCTTCTTATGCTGGTTGTCACATGGAACGATATCCAGCGTTTATTCTTATAA

Domains

Predicted by InterProScan.

Peptidase family M50 (Peptidase_M50)

(8-408)

PDZ domain (PDZ_6)

(212-258)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A7Z4S7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

39.535

100

0.403
  eeP Streptococcus thermophilus LMG 18311

39.671

100

0.4