Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   KVP03_RS10575 Genome accession   NZ_CP077959
Coordinates   346216..346314 (+) Length   32 a.a.
NCBI ID   WP_021320241.1    Uniprot ID   -
Organism   Streptococcus equi subsp. zooepidemicus strain SEZ_14-145     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 341216..351314
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KVP03_RS01655 (KVP03_01650) purE 341372..341860 (+) 489 WP_111692074.1 5-(carboxyamino)imidazole ribonucleotide mutase -
  KVP03_RS01660 (KVP03_01655) purK 341847..342941 (+) 1095 WP_230923161.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  KVP03_RS01665 (KVP03_01660) - 342951..343175 (+) 225 WP_012514713.1 hypothetical protein -
  KVP03_RS10570 - 343218..343490 (+) 273 WP_372585987.1 hypothetical protein -
  KVP03_RS01670 (KVP03_01665) purB 343629..344921 (+) 1293 WP_111692076.1 adenylosuccinate lyase -
  KVP03_RS01675 (KVP03_01670) comR 345219..346133 (+) 915 WP_111692077.1 helix-turn-helix domain-containing protein Regulator
  KVP03_RS10575 (KVP03_01675) comS 346216..346314 (+) 99 WP_021320241.1 quorum-sensing system DWW-type pheromone Regulator
  KVP03_RS01680 (KVP03_01680) ruvB 346348..347349 (+) 1002 WP_230923162.1 Holliday junction branch migration DNA helicase RuvB -
  KVP03_RS01685 (KVP03_01685) - 347597..348055 (+) 459 WP_111692078.1 low molecular weight protein-tyrosine-phosphatase -
  KVP03_RS01690 (KVP03_01690) - 348061..348462 (+) 402 WP_012514718.1 MORN repeat-containing protein -
  KVP03_RS01695 (KVP03_01695) - 348459..350240 (+) 1782 WP_043029239.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3937.66 Da        Isoelectric Point: 8.5430

>NTDB_id=585684 KVP03_RS10575 WP_021320241.1 346216..346314(+) (comS) [Streptococcus equi subsp. zooepidemicus strain SEZ_14-145]
MFKKYQYYLFLAALFLLHSAQLLSDIDWWRVG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=585684 KVP03_RS10575 WP_021320241.1 346216..346314(+) (comS) [Streptococcus equi subsp. zooepidemicus strain SEZ_14-145]
ATGTTTAAAAAATACCAATACTATCTGTTTTTAGCTGCTTTATTTCTACTTCATTCTGCCCAATTACTTAGTGATATTGA
CTGGTGGCGTGTTGGTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS8232

51.613

96.875

0.5
  comS Streptococcus pyogenes MGAS315

37.5

100

0.375