Detailed information    

insolico Bioinformatically predicted

Overview


Name   braR   Type   Regulator
Locus tag   MDRSPN_RS07090 Genome accession   NZ_AP018391
Coordinates   1367451..1368128 (-) Length   225 a.a.
NCBI ID   WP_000548959.1    Uniprot ID   Q9S1K2
Organism   Streptococcus pneumoniae strain MDRSPN001     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1362451..1373128
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MDRSPN_RS07055 (MDRSPN_01343) - 1362614..1363243 (-) 630 WP_000762091.1 NAD(P)-dependent oxidoreductase -
  MDRSPN_RS07060 (MDRSPN_01344) - 1363481..1363681 (+) 201 WP_001814296.1 hypothetical protein -
  MDRSPN_RS07070 (MDRSPN_01345) - 1364111..1364251 (+) 141 WP_000422775.1 MazG-like protein -
  MDRSPN_RS07075 - 1364258..1364434 (+) 177 WP_000166031.1 MazG-like protein -
  MDRSPN_RS07080 (MDRSPN_01346) thrS 1364492..1366435 (+) 1944 WP_000608349.1 threonine--tRNA ligase -
  MDRSPN_RS07085 (MDRSPN_01347) - 1366484..1367458 (-) 975 WP_000887953.1 HAMP domain-containing histidine kinase -
  MDRSPN_RS07090 (MDRSPN_01348) braR 1367451..1368128 (-) 678 WP_000548959.1 response regulator transcription factor Regulator
  MDRSPN_RS07095 (MDRSPN_01349) - 1368284..1369357 (+) 1074 WP_001273823.1 DUF2974 domain-containing protein -
  MDRSPN_RS07100 (MDRSPN_01350) - 1369448..1369750 (-) 303 WP_120164252.1 hypothetical protein -
  MDRSPN_RS07105 (MDRSPN_01351) - 1369819..1370256 (-) 438 WP_120164253.1 Rrf2 family transcriptional regulator -
  MDRSPN_RS07110 (MDRSPN_01352) - 1370332..1371174 (-) 843 WP_172581573.1 metallophosphoesterase -
  MDRSPN_RS07115 (MDRSPN_01353) - 1371287..1371937 (+) 651 WP_120164255.1 metal-dependent transcriptional regulator -
  MDRSPN_RS11635 - 1371918..1372109 (+) 192 WP_001816503.1 hypothetical protein -
  MDRSPN_RS07125 (MDRSPN_01354) - 1372135..1372810 (+) 676 Protein_1362 nicotinamide mononucleotide transporter -
  MDRSPN_RS11730 - 1372912..1372983 (+) 72 Protein_1363 glutamine ABC transporter permease -

Sequence


Protein


Download         Length: 225 a.a.        Molecular weight: 25964.16 Da        Isoelectric Point: 5.1362

>NTDB_id=58553 MDRSPN_RS07090 WP_000548959.1 1367451..1368128(-) (braR) [Streptococcus pneumoniae strain MDRSPN001]
MHKILLIEDDQVIRQQIGKMLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGQVLNLTKNEFQIL
RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=58553 MDRSPN_RS07090 WP_000548959.1 1367451..1368128(-) (braR) [Streptococcus pneumoniae strain MDRSPN001]
ATGCACAAGATTTTATTAATAGAAGATGATCAGGTCATTCGTCAACAGATTGGGAAAATGCTCTCTGAATGGGGATTTGA
AGTGGTCCTGGTAGAAGACTTTATGGAAGTTTTGAGTCTATTTGTTCAGTCGGAACCTCATCTGGTCCTCATGGATATTG
GTTTGCCCTTGTTTAATGGTTATCACTGGTGTCAGGAAATCCGCAAGATTTCCAAGGTACCTATCATGTTTCTTTCTTCG
AGAGACCAGGCTATGGATATTGTCATGGCAATCAATATGGGGGCGGATGACTTTGTGACCAAGCCTTTTGACCAGCAGGT
TCTTTTAGCTAAGGTTCAGGGCTTGTTGCGTCGTTCCTATGAGTTTGGGCGTGATGAGAGTTTGCTGGAATATGCTGGTG
TTATCCTCAATACCAAATCCATGGATTTACATTATCAAGGGCAAGTCTTGAATTTGACCAAGAATGAATTCCAGATTTTA
CGCGTGTTATTTGAGCATGCAGGCAACATCGTAGCACGTGACGACCTGATGCGGGAACTTTGGAACAGTGACTTTTTCAT
TGATGATAATACCCTCTCTGTCAATGTGGCTCGTTTGCGTAAAAAGTTGGAGGAGCAGGGATTGGTAGGATTTATCGAGA
CCAAGAAAGGAATAGGGTACGGATTGAAGCATGCTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q9S1K2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.624

96.889

0.471

  vicR Streptococcus mutans UA159

35.319

100

0.369


Multiple sequence alignment