Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   KU515_RS05480 Genome accession   NZ_CP077932
Coordinates   1110541..1111227 (-) Length   228 a.a.
NCBI ID   WP_072468915.1    Uniprot ID   A0A5F0HFN7
Organism   Staphylococcus aureus strain 194     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1105541..1116227
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU515_RS05460 (KU515_05445) rpsT 1106455..1106706 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  KU515_RS05465 (KU515_05450) holA 1106751..1107725 (-) 975 WP_001282573.1 DNA polymerase III subunit delta -
  KU515_RS05470 (KU515_05455) comEC 1107782..1109983 (-) 2202 WP_001622275.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  KU515_RS05475 (KU515_05460) - 1109988..1110449 (-) 462 WP_000439693.1 ComE operon protein 2 -
  KU515_RS05480 (KU515_05465) comEA 1110541..1111227 (-) 687 WP_072468915.1 ComEA family DNA-binding protein Machinery gene
  KU515_RS05485 (KU515_05470) - 1111267..1111983 (-) 717 WP_000084840.1 class I SAM-dependent DNA methyltransferase -
  KU515_RS05490 (KU515_05475) rsfS 1111986..1112339 (-) 354 WP_001088020.1 ribosome silencing factor -
  KU515_RS05495 (KU515_05480) yqeK 1112340..1112924 (-) 585 WP_001017837.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  KU515_RS05500 (KU515_05485) nadD 1112914..1113483 (-) 570 WP_000725165.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  KU515_RS05505 (KU515_05490) yhbY 1113486..1113776 (-) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  KU515_RS05510 (KU515_05495) aroE 1113780..1114586 (-) 807 WP_000666750.1 shikimate dehydrogenase -
  KU515_RS05515 (KU515_05500) yqeH 1114600..1115700 (-) 1101 WP_001280146.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25812.41 Da        Isoelectric Point: 9.3305

>NTDB_id=585503 KU515_RS05480 WP_072468915.1 1110541..1111227(-) (comEA) [Staphylococcus aureus strain 194]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTALKQSTSENSSLSKLEDVQAKDGDNSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGENSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=585503 KU515_RS05480 WP_072468915.1 1110541..1111227(-) (comEA) [Staphylococcus aureus strain 194]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGCCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACACCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGAAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5F0HFN7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.476

99.561

0.961
  comEA Staphylococcus aureus N315

96.476

99.561

0.961