Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   KU509_RS01990 Genome accession   NZ_CP077917
Coordinates   375898..376941 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain 280     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 370898..381941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU509_RS01960 (KU509_01955) - 371316..372572 (-) 1257 WP_001789555.1 aminopeptidase -
  KU509_RS01965 (KU509_01960) - 372575..372775 (-) 201 WP_000180460.1 DUF1128 family protein -
  KU509_RS01970 (KU509_01965) - 372922..373386 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  KU509_RS01975 (KU509_01970) - 373393..373668 (+) 276 WP_000428171.1 hypothetical protein -
  KU509_RS01980 (KU509_01975) - 373946..375163 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  KU509_RS01985 (KU509_01980) vraR 375279..375908 (-) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  KU509_RS01990 (KU509_01985) vraS 375898..376941 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  KU509_RS01995 (KU509_01990) liaF 376938..377639 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  KU509_RS02000 (KU509_01995) - 377654..378040 (-) 387 WP_001110179.1 hypothetical protein -
  KU509_RS02005 (KU509_02000) map 378257..379015 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  KU509_RS02010 (KU509_02005) - 379546..380532 (+) 987 WP_000999716.1 FUSC family protein -
  KU509_RS02015 (KU509_02010) - 381022..381435 (-) 414 WP_001670387.1 hypothetical protein -
  KU509_RS02020 (KU509_02015) - 381464..381574 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=585035 KU509_RS01990 WP_001017131.1 375898..376941(-) (vraS) [Staphylococcus aureus strain 280]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=585035 KU509_RS01990 WP_001017131.1 375898..376941(-) (vraS) [Staphylococcus aureus strain 280]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAGTTGCATAAGTTGCGACTTAAAACTCAAAATTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTGGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1