Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   KU505_RS08320 Genome accession   NZ_CP077899
Coordinates   1746026..1746712 (-) Length   228 a.a.
NCBI ID   WP_072468915.1    Uniprot ID   A0A5F0HFN7
Organism   Staphylococcus aureus strain 324     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1741026..1751712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU505_RS08300 (KU505_08245) rpsT 1741940..1742191 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  KU505_RS08305 (KU505_08250) holA 1742236..1743210 (-) 975 WP_001282573.1 DNA polymerase III subunit delta -
  KU505_RS08310 (KU505_08255) comEC 1743267..1745468 (-) 2202 WP_225806062.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  KU505_RS08315 (KU505_08260) - 1745473..1745934 (-) 462 WP_000439693.1 ComE operon protein 2 -
  KU505_RS08320 (KU505_08265) comEA 1746026..1746712 (-) 687 WP_072468915.1 ComEA family DNA-binding protein Machinery gene
  KU505_RS08325 (KU505_08270) - 1746752..1747468 (-) 717 WP_000084840.1 class I SAM-dependent DNA methyltransferase -
  KU505_RS08330 (KU505_08275) rsfS 1747471..1747824 (-) 354 WP_001088020.1 ribosome silencing factor -
  KU505_RS08335 (KU505_08280) yqeK 1747825..1748409 (-) 585 WP_001017838.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  KU505_RS08340 (KU505_08285) nadD 1748399..1748968 (-) 570 WP_000725165.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  KU505_RS08345 (KU505_08290) yhbY 1748971..1749261 (-) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  KU505_RS08350 (KU505_08295) aroE 1749265..1750071 (-) 807 WP_000666754.1 shikimate dehydrogenase -
  KU505_RS08355 (KU505_08300) yqeH 1750085..1751185 (-) 1101 WP_001280146.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25812.41 Da        Isoelectric Point: 9.3305

>NTDB_id=584833 KU505_RS08320 WP_072468915.1 1746026..1746712(-) (comEA) [Staphylococcus aureus strain 324]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTALKQSTSENSSLSKLEDVQAKDGDNSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGENSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=584833 KU505_RS08320 WP_072468915.1 1746026..1746712(-) (comEA) [Staphylococcus aureus strain 324]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGCCAAAGATGGAGATAATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGAAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5F0HFN7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.476

99.561

0.961
  comEA Staphylococcus aureus N315

96.476

99.561

0.961