Detailed information    

insolico Bioinformatically predicted

Overview

Name   coiA   Type   Machinery gene
Locus tag   KU505_RS05315 Genome accession   NZ_CP077899
Coordinates   1100773..1101759 (+) Length   328 a.a.
NCBI ID   WP_060649834.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 324     
Function   require for natural transformation (predicted from homology)   
Unclear

Genomic Context

Location: 1095773..1106759
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU505_RS05290 (KU505_05250) opp4B 1095984..1096946 (+) 963 WP_000593424.1 oligopeptide ABC transporter permease -
  KU505_RS05295 (KU505_05255) opp4C 1096958..1097839 (+) 882 WP_225806022.1 oligopeptide ABC transporter permease -
  KU505_RS05300 (KU505_05260) trpS 1097883..1098872 (-) 990 WP_000448934.1 tryptophan--tRNA ligase -
  KU505_RS05305 (KU505_05265) spxA 1099167..1099562 (+) 396 WP_000258003.1 transcriptional regulator SpxA -
  KU505_RS05310 (KU505_05270) mecA 1099933..1100652 (+) 720 WP_001217728.1 adaptor protein MecA -
  KU505_RS05315 (KU505_05275) coiA 1100773..1101759 (+) 987 WP_060649834.1 competence protein CoiA Machinery gene
  KU505_RS05320 (KU505_05280) pepF 1101807..1103615 (+) 1809 WP_000082725.1 oligoendopeptidase F -
  KU505_RS05325 (KU505_05285) yjbH 1104075..1104881 (-) 807 WP_000896697.1 protease adaptor protein YjbH -
  KU505_RS05330 (KU505_05290) - 1104904..1105269 (-) 366 WP_000214067.1 truncated hemoglobin YjbI -
  KU505_RS05335 (KU505_05295) - 1105373..1105966 (-) 594 WP_000224614.1 CYTH domain-containing protein -
  KU505_RS05340 (KU505_05300) - 1106152..1106499 (+) 348 WP_225806023.1 hypothetical protein -

Sequence

Protein


Download         Length: 328 a.a.        Molecular weight: 38815.47 Da        Isoelectric Point: 9.7732

>NTDB_id=584818 KU505_RS05315 WP_060649834.1 1100773..1101759(+) (coiA) [Staphylococcus aureus strain 324]
MLVALNEEKERVLATTALRKIKYFCPVCGKQVILKRGLKVISHFAHKHLTEQKCFNNESIKHYKSKLILAQMIQQQGCKV
EIEPFLKEIKQIPDILINNKYVIELQYSPIPYKQILQRTEGLKKMGYKVSWLLNDVDYCHNKVKFNHFQSIFINPITRKL
HTFNLEKKQIMMFQQIQYLGGHKYVAEKRNAKISELFNEAPCDYHAVYKLSKFAINQYIKYCRWQNSVLEPTLSAMYQLQ
LTDQEVVHNYGYIFPEQIYIENHPIEWQLQVDLWLKNGKSKLLSDNLNYFKLKKFIVALESKTAIIEKLINNYLNISSNR
GNDVQILF

Nucleotide


Download         Length: 987 bp        

>NTDB_id=584818 KU505_RS05315 WP_060649834.1 1100773..1101759(+) (coiA) [Staphylococcus aureus strain 324]
ATGTTAGTAGCTTTAAATGAAGAAAAGGAACGTGTGTTAGCAACTACTGCATTGAGAAAGATAAAATATTTTTGTCCGGT
GTGTGGCAAGCAAGTTATTTTAAAGCGTGGGCTCAAAGTAATTAGTCATTTTGCACATAAACATTTAACGGAACAAAAAT
GTTTTAATAATGAATCGATTAAACATTATAAAAGTAAATTGATTTTAGCACAGATGATACAGCAACAAGGATGTAAAGTA
GAGATAGAACCATTTTTAAAAGAAATAAAACAAATTCCGGATATTTTGATTAATAATAAATATGTTATTGAGCTACAGTA
TTCGCCAATTCCTTATAAACAGATTCTTCAACGAACGGAAGGTTTAAAGAAAATGGGATATAAAGTAAGTTGGTTATTAA
ATGATGTTGATTATTGTCATAATAAAGTGAAGTTCAATCATTTTCAAAGTATATTTATTAATCCAATCACTCGAAAACTT
CATACGTTCAATTTAGAGAAAAAACAAATAATGATGTTTCAACAAATACAATATTTAGGCGGGCACAAATATGTCGCTGA
AAAAAGGAATGCCAAAATTAGTGAGTTGTTTAATGAGGCGCCTTGTGATTATCATGCTGTTTATAAATTATCAAAGTTCG
CAATTAATCAATATATCAAATACTGTCGCTGGCAAAATTCTGTTTTAGAACCCACTTTAAGTGCAATGTATCAATTACAG
TTAACTGATCAAGAAGTAGTGCACAATTATGGTTATATTTTTCCAGAGCAAATTTATATTGAAAATCATCCAATTGAGTG
GCAATTACAAGTTGATTTATGGTTAAAGAATGGAAAAAGCAAATTACTAAGTGACAATCTTAATTATTTTAAACTGAAAA
AGTTTATTGTTGCTCTAGAAAGTAAAACAGCAATTATAGAAAAACTTATTAACAATTATTTAAATATTAGTTCAAATAGA
GGTAATGACGTGCAAATTTTGTTCTAA

Domains

Predicted by InterproScan.

Competence protein CoiA-like family (CoiA_nuc)

(6-304)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Staphylococcus aureus N315

96.341

100

0.963
  coiA Staphylococcus aureus MW2

96.037

100

0.96