Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | KU540_RS08665 | Genome accession | NZ_CP077894 |
| Coordinates | 1709937..1710236 (+) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain 329 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1704937..1715236
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KU540_RS08625 (KU540_08575) | - | 1704998..1705201 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| KU540_RS08630 (KU540_08580) | - | 1705198..1706184 (+) | 987 | WP_000161307.1 | ROK family glucokinase | - |
| KU540_RS08635 (KU540_08585) | - | 1706184..1706513 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| KU540_RS08640 (KU540_08590) | - | 1706510..1707133 (+) | 624 | WP_001223009.1 | MBL fold metallo-hydrolase | - |
| KU540_RS08645 (KU540_08595) | comGA | 1707185..1708159 (+) | 975 | WP_000697220.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| KU540_RS08650 (KU540_08600) | comGB | 1708131..1709201 (+) | 1071 | WP_000776414.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| KU540_RS08655 (KU540_08605) | comGC | 1709215..1709526 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| KU540_RS08660 (KU540_08610) | comGD | 1709504..1709950 (+) | 447 | WP_001796473.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| KU540_RS08665 (KU540_08615) | comGE | 1709937..1710236 (+) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| KU540_RS08670 (KU540_08620) | comGF | 1710154..1710651 (+) | 498 | WP_001796472.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| KU540_RS08675 (KU540_08625) | - | 1710748..1710894 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| KU540_RS08680 (KU540_08630) | - | 1710884..1711408 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| KU540_RS08685 (KU540_08635) | gcvT | 1711567..1712658 (+) | 1092 | WP_000093340.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| KU540_RS08690 (KU540_08640) | gcvPA | 1712678..1714024 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=584702 KU540_RS08665 WP_000844413.1 1709937..1710236(+) (comGE) [Staphylococcus aureus strain 329]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=584702 KU540_RS08665 WP_000844413.1 1709937..1710236(+) (comGE) [Staphylococcus aureus strain 329]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |