Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   KU519_RS00890 Genome accession   NZ_CP077888
Coordinates   147174..148217 (-) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain 334     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 142174..153217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KU519_RS00860 (KU519_00865) - 142592..143848 (-) 1257 WP_001795438.1 aminopeptidase -
  KU519_RS00865 (KU519_00870) - 143851..144051 (-) 201 WP_000180461.1 DUF1128 family protein -
  KU519_RS00870 (KU519_00875) - 144198..144662 (+) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  KU519_RS00875 (KU519_00880) - 144669..144944 (+) 276 WP_000428172.1 YtxH domain-containing protein -
  KU519_RS00880 (KU519_00885) - 145222..146439 (+) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  KU519_RS00885 (KU519_00890) vraR 146555..147184 (-) 630 WP_000153530.1 two-component system response regulator VraR Regulator
  KU519_RS00890 (KU519_00895) vraS 147174..148217 (-) 1044 WP_001017131.1 sensor histidine kinase Regulator
  KU519_RS00895 (KU519_00900) liaF 148214..148915 (-) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  KU519_RS00900 (KU519_00905) - 148930..149316 (-) 387 WP_001110179.1 hypothetical protein -
  KU519_RS00905 (KU519_00910) map 149533..150291 (-) 759 WP_000636142.1 type I methionyl aminopeptidase -
  KU519_RS00910 (KU519_00915) - 150878..151850 (+) 973 Protein_142 FUSC family protein -
  KU519_RS00915 (KU519_00920) - 152281..152694 (-) 414 WP_001549145.1 hypothetical protein -
  KU519_RS00920 (KU519_00925) - 152723..152833 (-) 111 WP_001790257.1 hypothetical protein -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=584557 KU519_RS00890 WP_001017131.1 147174..148217(-) (vraS) [Staphylococcus aureus strain 334]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=584557 KU519_RS00890 WP_001017131.1 147174..148217(-) (vraS) [Staphylococcus aureus strain 334]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTGAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTTTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
TATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1