Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   B1NLA3E_RS16010 Genome accession   NC_021171
Coordinates   3349934..3350728 (-) Length   264 a.a.
NCBI ID   WP_015594880.1    Uniprot ID   N0AVX7
Organism   Bacillus sp. 1NLA3E     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 3344934..3355728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  B1NLA3E_RS15990 (B1NLA3E_15390) bcd 3345013..3346107 (-) 1095 WP_015594876.1 branched-chain amino acid dehydrogenase -
  B1NLA3E_RS15995 (B1NLA3E_15395) - 3346298..3348352 (-) 2055 WP_041580605.1 sigma-54-dependent Fis family transcriptional regulator -
  B1NLA3E_RS16000 (B1NLA3E_15400) - 3348516..3348761 (+) 246 WP_015594878.1 DUF2627 domain-containing protein -
  B1NLA3E_RS16005 (B1NLA3E_15405) - 3349073..3349801 (-) 729 WP_041580606.1 glycerophosphodiester phosphodiesterase -
  B1NLA3E_RS16010 (B1NLA3E_15410) spo0A 3349934..3350728 (-) 795 WP_015594880.1 sporulation transcription factor Spo0A Regulator
  B1NLA3E_RS16015 (B1NLA3E_15415) spoIVB 3351008..3352297 (-) 1290 WP_041580607.1 SpoIVB peptidase -
  B1NLA3E_RS16020 (B1NLA3E_15420) recN 3352425..3354107 (-) 1683 WP_015594882.1 DNA repair protein RecN Machinery gene
  B1NLA3E_RS16025 (B1NLA3E_15425) argR 3354124..3354573 (-) 450 WP_015594883.1 transcriptional regulator ArgR -
  B1NLA3E_RS16030 (B1NLA3E_15430) - 3354856..3355701 (-) 846 WP_015594884.1 TlyA family RNA methyltransferase -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29497.05 Da        Isoelectric Point: 6.3886

>NTDB_id=58398 B1NLA3E_RS16010 WP_015594880.1 3349934..3350728(-) (spo0A) [Bacillus sp. 1NLA3E]
MKKIKVCVVDDNRELVGLLEEYISSLDDMEIVGVAHNGQECLDILEDTTPDVLVLDIIMPHLDGLAVLEKLRETKRSNFP
NVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLANHIRQVSGQTNTGMRKSAQSPYRPAQSEQKPKNLDACITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMT
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=58398 B1NLA3E_RS16010 WP_015594880.1 3349934..3350728(-) (spo0A) [Bacillus sp. 1NLA3E]
GTGAAAAAAATAAAAGTGTGCGTTGTTGATGACAATAGAGAATTAGTTGGATTATTAGAGGAATACATTTCATCCTTGGA
TGATATGGAAATTGTCGGAGTTGCTCATAACGGTCAAGAATGTCTCGATATTTTAGAAGACACCACTCCAGATGTTCTTG
TTTTAGATATTATTATGCCACATTTAGATGGTCTTGCTGTATTGGAAAAACTTCGTGAAACGAAAAGAAGTAACTTTCCA
AATGTAATAATGCTAACTGCGTTCGGACAGGAAGATGTTACGAAGAAAGCAGTTGAATTGGGTGCATCGTATTTTATTCT
TAAACCATTTGATATGGAAAATTTAGCTAACCACATTCGTCAGGTTAGTGGCCAAACCAATACTGGTATGAGAAAGTCAG
CGCAGTCCCCGTATCGTCCAGCTCAATCAGAGCAAAAGCCTAAAAATTTAGATGCATGTATCACGAGCATTATTCACGAA
ATTGGCGTACCAGCACATATTAAGGGTTATATGTATTTGAGAGAGGCAATTTCTATGGTCTATAATGACATTGAACTGCT
TGGATCGATTACAAAAGTTCTATACCCTGATATTGCAAAGAAATTTAATACAACCGCAAGCCGAGTTGAACGGGCAATCC
GCCACGCAATCGAAGTAGCGTGGAGTCGGGGCAATATCGATTCAATTTCTTCTCTGTTTGGCTACACCGTCAGCATGACA
AAAGCAAAACCAACAAATTCGGAATTTATCGCGATGGTTGCAGATAAACTAAGATTAGAGCATAAAGCATCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-119)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB N0AVX7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.524

100

0.814

Multiple sequence alignment