Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | B1NLA3E_RS00530 | Genome accession | NC_021171 |
| Coordinates | 102415..104856 (+) | Length | 813 a.a. |
| NCBI ID | WP_015591930.1 | Uniprot ID | N0AM85 |
| Organism | Bacillus sp. 1NLA3E | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 97415..109856
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| B1NLA3E_RS00515 (B1NLA3E_00380) | - | 100296..100757 (+) | 462 | WP_015591927.1 | CtsR family transcriptional regulator | - |
| B1NLA3E_RS00520 (B1NLA3E_00385) | - | 100780..101328 (+) | 549 | WP_015591928.1 | UvrB/UvrC motif-containing protein | - |
| B1NLA3E_RS00525 (B1NLA3E_00390) | - | 101330..102403 (+) | 1074 | WP_015591929.1 | protein arginine kinase | - |
| B1NLA3E_RS00530 (B1NLA3E_00395) | clpC | 102415..104856 (+) | 2442 | WP_015591930.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| B1NLA3E_RS00535 (B1NLA3E_00400) | radA | 105380..106759 (+) | 1380 | WP_015591931.1 | DNA repair protein RadA | Machinery gene |
| B1NLA3E_RS00540 (B1NLA3E_00405) | - | 107049..108134 (+) | 1086 | WP_015591932.1 | PIN/TRAM domain-containing protein | - |
| B1NLA3E_RS00545 (B1NLA3E_00410) | ispD | 108151..108843 (+) | 693 | WP_015591933.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| B1NLA3E_RS00550 (B1NLA3E_00415) | ispF | 108979..109458 (+) | 480 | WP_015591934.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 90445.32 Da Isoelectric Point: 6.1499
>NTDB_id=58380 B1NLA3E_RS00530 WP_015591930.1 102415..104856(+) (clpC) [Bacillus sp. 1NLA3E]
MMFGRFTERAQKVLALAQEEAIRLSHNNIGTEHILLGLVREGEGIAAKALYALGLGSEKIQKEVENLIGRGQEASQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGHQGGGTANANTP
TLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMT
LDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYR
KYIEKDAALERRFQPIRVDEPTADESILILKGLRDRYEAHHRVSITDEAIEAAVSLSDRYIPDRFLPDKAIDLIDEAGSK
VRLRSYTTPPNLKELEVKLEVVRKEKDAAVQSQEFEKAASLRDSEQRLREQLEETKKTWKEKQGQENSEVTVEDIATVVA
NWTGIPVSKLAQTETDKLLKLEEIIHSRVIGQEEAVVAVSKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAEA
MFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTD
SKGRTVDFRNTVLIMTSNVGAEALKRNKYVGFNIQDGAQDYKDMKGKVMEELKKAFRPEFLNRIDEIIVFHALERAQLKQ
IVTLLSEQLIKRLKDQHIQLELTDAAKDKISDEGYDPEYGARPLRRAIQKHIEDRLSEELLKGTVLTGHNIMIDVDNGEF
VIRADQPTAIPKP
MMFGRFTERAQKVLALAQEEAIRLSHNNIGTEHILLGLVREGEGIAAKALYALGLGSEKIQKEVENLIGRGQEASQTIHY
TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNESGHQGGGTANANTP
TLDSLARDLTAIAREGSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPEILRDKRVMT
LDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEYR
KYIEKDAALERRFQPIRVDEPTADESILILKGLRDRYEAHHRVSITDEAIEAAVSLSDRYIPDRFLPDKAIDLIDEAGSK
VRLRSYTTPPNLKELEVKLEVVRKEKDAAVQSQEFEKAASLRDSEQRLREQLEETKKTWKEKQGQENSEVTVEDIATVVA
NWTGIPVSKLAQTETDKLLKLEEIIHSRVIGQEEAVVAVSKAVRRARAGLKDPKRPIGSFVFLGPTGVGKTELARALAEA
MFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVILLDEIEKAHPDVFNILLQVLEDGRLTD
SKGRTVDFRNTVLIMTSNVGAEALKRNKYVGFNIQDGAQDYKDMKGKVMEELKKAFRPEFLNRIDEIIVFHALERAQLKQ
IVTLLSEQLIKRLKDQHIQLELTDAAKDKISDEGYDPEYGARPLRRAIQKHIEDRLSEELLKGTVLTGHNIMIDVDNGEF
VIRADQPTAIPKP
Nucleotide
Download Length: 2442 bp
>NTDB_id=58380 B1NLA3E_RS00530 WP_015591930.1 102415..104856(+) (clpC) [Bacillus sp. 1NLA3E]
ATGATGTTTGGACGCTTTACAGAAAGAGCACAAAAGGTGTTGGCACTTGCCCAAGAGGAAGCAATTCGGTTAAGTCACAA
TAATATAGGAACAGAGCATATTTTATTAGGACTTGTTAGAGAAGGAGAAGGAATAGCTGCTAAAGCGCTATACGCACTCG
GTCTTGGTTCAGAAAAGATTCAGAAGGAAGTTGAAAACCTAATCGGACGAGGTCAGGAAGCATCCCAAACGATTCATTAT
ACTCCTCGAGCTAAAAAGGTGATAGAGCTCTCGATGGATGAAGCCCGCAAATTAGGTCATTCATATGTTGGGACAGAACA
TATTTTGCTAGGTTTAATTCGTGAAGGTGAAGGAGTTGCAGCTCGAGTTCTTAATAATTTGGGTGTAAGTCTTAATAAAG
CCCGTCAGCAAGTATTACAATTATTAGGAAGTAATGAATCAGGTCATCAAGGGGGAGGTACTGCAAATGCGAACACTCCG
ACATTGGATAGCCTTGCCCGTGATCTAACTGCTATTGCTCGAGAAGGAAGTCTTGACCCTGTTATTGGTCGTAGTAAAGA
AATCCAAAGGGTTATTGAAGTGCTCAGCAGACGTACAAAAAATAATCCAGTCTTAATAGGTGAACCAGGTGTCGGGAAAA
CAGCGATTGCTGAAGGACTTGCTCAGCAGATTGTTAACAATGAAGTACCTGAGATTCTACGTGATAAACGGGTAATGACT
CTTGATATGGGAACCGTTGTTGCTGGAACAAAGTATCGCGGTGAATTCGAGGATCGACTAAAAAAGGTCATGGATGAAAT
ACGCCAAGCTGGAAATATTATTTTATTTATTGATGAGTTGCATACACTTATTGGTGCAGGTGGAGCTGAAGGTGCAATCG
ATGCTTCAAATATTTTAAAACCGTCATTAGCACGTGGAGAATTGCAATGTATCGGTGCTACTACGTTAGATGAATACCGT
AAATATATTGAAAAAGATGCTGCGCTCGAGCGTCGTTTCCAACCAATTAGGGTTGATGAGCCTACAGCTGATGAGTCAAT
TCTCATATTAAAAGGTCTTAGAGATCGCTATGAAGCACATCACCGTGTTTCGATTACTGATGAGGCAATTGAAGCTGCAG
TTTCATTGTCAGATCGTTATATTCCTGATCGTTTTCTACCTGATAAAGCCATTGACTTAATTGATGAAGCGGGATCAAAG
GTGCGTTTGCGTTCTTACACCACTCCACCAAATTTAAAAGAGCTTGAGGTTAAGCTTGAAGTAGTTCGTAAGGAAAAGGA
TGCAGCAGTCCAAAGTCAAGAATTTGAAAAAGCGGCTTCTTTACGAGATTCAGAACAACGACTTCGAGAGCAATTAGAAG
AAACGAAGAAGACATGGAAAGAAAAGCAAGGCCAGGAAAATAGTGAAGTTACAGTAGAGGATATTGCTACTGTTGTTGCA
AACTGGACTGGAATACCTGTTTCAAAATTGGCGCAAACTGAGACCGATAAACTGTTGAAATTAGAAGAAATTATTCATTC
TCGTGTGATTGGCCAAGAAGAGGCTGTAGTAGCTGTTTCGAAAGCAGTAAGACGTGCGAGAGCTGGACTAAAAGATCCAA
AGCGTCCGATTGGTTCATTCGTTTTCCTTGGGCCAACAGGTGTTGGGAAAACTGAACTTGCTCGTGCATTAGCCGAAGCC
ATGTTTGGTGATGAAGATGCGATGATTCGCATTGATATGTCAGAGTATATGGAAAAACATTCTACTTCAAGATTAGTTGG
ATCTCCTCCAGGCTATGTAGGTTATGAAGAAGGTGGACAATTAACTGAAAAAGTAAGAAGAAAGCCATATTCAGTCATTT
TATTAGATGAAATTGAAAAAGCTCACCCGGATGTTTTCAATATCCTCCTTCAAGTTCTGGAAGATGGGCGTTTAACAGAC
TCTAAAGGTCGTACTGTAGATTTCCGTAATACAGTCTTAATCATGACATCAAATGTTGGCGCCGAGGCGTTAAAGCGAAA
TAAATACGTAGGCTTTAACATACAAGATGGAGCTCAAGATTACAAGGATATGAAAGGAAAGGTAATGGAAGAGCTGAAGA
AGGCGTTCCGACCTGAATTCTTGAACAGAATCGATGAAATCATTGTGTTCCATGCTCTGGAAAGAGCTCAATTAAAGCAG
ATTGTAACGTTGCTGTCAGAGCAATTAATAAAACGTTTGAAGGATCAACATATCCAATTAGAATTAACCGATGCTGCAAA
AGATAAAATCTCAGATGAAGGATACGACCCAGAATATGGGGCTCGTCCGTTGCGCAGAGCTATTCAAAAACATATTGAGG
ATCGATTATCAGAAGAACTATTAAAAGGTACTGTTTTAACGGGTCATAACATCATGATTGATGTTGATAACGGTGAGTTT
GTTATTAGAGCGGACCAACCTACTGCGATACCGAAGCCTTAA
ATGATGTTTGGACGCTTTACAGAAAGAGCACAAAAGGTGTTGGCACTTGCCCAAGAGGAAGCAATTCGGTTAAGTCACAA
TAATATAGGAACAGAGCATATTTTATTAGGACTTGTTAGAGAAGGAGAAGGAATAGCTGCTAAAGCGCTATACGCACTCG
GTCTTGGTTCAGAAAAGATTCAGAAGGAAGTTGAAAACCTAATCGGACGAGGTCAGGAAGCATCCCAAACGATTCATTAT
ACTCCTCGAGCTAAAAAGGTGATAGAGCTCTCGATGGATGAAGCCCGCAAATTAGGTCATTCATATGTTGGGACAGAACA
TATTTTGCTAGGTTTAATTCGTGAAGGTGAAGGAGTTGCAGCTCGAGTTCTTAATAATTTGGGTGTAAGTCTTAATAAAG
CCCGTCAGCAAGTATTACAATTATTAGGAAGTAATGAATCAGGTCATCAAGGGGGAGGTACTGCAAATGCGAACACTCCG
ACATTGGATAGCCTTGCCCGTGATCTAACTGCTATTGCTCGAGAAGGAAGTCTTGACCCTGTTATTGGTCGTAGTAAAGA
AATCCAAAGGGTTATTGAAGTGCTCAGCAGACGTACAAAAAATAATCCAGTCTTAATAGGTGAACCAGGTGTCGGGAAAA
CAGCGATTGCTGAAGGACTTGCTCAGCAGATTGTTAACAATGAAGTACCTGAGATTCTACGTGATAAACGGGTAATGACT
CTTGATATGGGAACCGTTGTTGCTGGAACAAAGTATCGCGGTGAATTCGAGGATCGACTAAAAAAGGTCATGGATGAAAT
ACGCCAAGCTGGAAATATTATTTTATTTATTGATGAGTTGCATACACTTATTGGTGCAGGTGGAGCTGAAGGTGCAATCG
ATGCTTCAAATATTTTAAAACCGTCATTAGCACGTGGAGAATTGCAATGTATCGGTGCTACTACGTTAGATGAATACCGT
AAATATATTGAAAAAGATGCTGCGCTCGAGCGTCGTTTCCAACCAATTAGGGTTGATGAGCCTACAGCTGATGAGTCAAT
TCTCATATTAAAAGGTCTTAGAGATCGCTATGAAGCACATCACCGTGTTTCGATTACTGATGAGGCAATTGAAGCTGCAG
TTTCATTGTCAGATCGTTATATTCCTGATCGTTTTCTACCTGATAAAGCCATTGACTTAATTGATGAAGCGGGATCAAAG
GTGCGTTTGCGTTCTTACACCACTCCACCAAATTTAAAAGAGCTTGAGGTTAAGCTTGAAGTAGTTCGTAAGGAAAAGGA
TGCAGCAGTCCAAAGTCAAGAATTTGAAAAAGCGGCTTCTTTACGAGATTCAGAACAACGACTTCGAGAGCAATTAGAAG
AAACGAAGAAGACATGGAAAGAAAAGCAAGGCCAGGAAAATAGTGAAGTTACAGTAGAGGATATTGCTACTGTTGTTGCA
AACTGGACTGGAATACCTGTTTCAAAATTGGCGCAAACTGAGACCGATAAACTGTTGAAATTAGAAGAAATTATTCATTC
TCGTGTGATTGGCCAAGAAGAGGCTGTAGTAGCTGTTTCGAAAGCAGTAAGACGTGCGAGAGCTGGACTAAAAGATCCAA
AGCGTCCGATTGGTTCATTCGTTTTCCTTGGGCCAACAGGTGTTGGGAAAACTGAACTTGCTCGTGCATTAGCCGAAGCC
ATGTTTGGTGATGAAGATGCGATGATTCGCATTGATATGTCAGAGTATATGGAAAAACATTCTACTTCAAGATTAGTTGG
ATCTCCTCCAGGCTATGTAGGTTATGAAGAAGGTGGACAATTAACTGAAAAAGTAAGAAGAAAGCCATATTCAGTCATTT
TATTAGATGAAATTGAAAAAGCTCACCCGGATGTTTTCAATATCCTCCTTCAAGTTCTGGAAGATGGGCGTTTAACAGAC
TCTAAAGGTCGTACTGTAGATTTCCGTAATACAGTCTTAATCATGACATCAAATGTTGGCGCCGAGGCGTTAAAGCGAAA
TAAATACGTAGGCTTTAACATACAAGATGGAGCTCAAGATTACAAGGATATGAAAGGAAAGGTAATGGAAGAGCTGAAGA
AGGCGTTCCGACCTGAATTCTTGAACAGAATCGATGAAATCATTGTGTTCCATGCTCTGGAAAGAGCTCAATTAAAGCAG
ATTGTAACGTTGCTGTCAGAGCAATTAATAAAACGTTTGAAGGATCAACATATCCAATTAGAATTAACCGATGCTGCAAA
AGATAAAATCTCAGATGAAGGATACGACCCAGAATATGGGGCTCGTCCGTTGCGCAGAGCTATTCAAAAACATATTGAGG
ATCGATTATCAGAAGAACTATTAAAAGGTACTGTTTTAACGGGTCATAACATCATGATTGATGTTGATAACGGTGAGTTT
GTTATTAGAGCGGACCAACCTACTGCGATACCGAAGCCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
87.392 |
99.508 |
0.87 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.075 |
99.754 |
0.49 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.182 |
100 |
0.469 |
| clpC | Streptococcus thermophilus LMD-9 |
45.894 |
100 |
0.467 |
| clpC | Streptococcus mutans UA159 |
44.606 |
100 |
0.453 |
| clpC | Streptococcus pneumoniae D39 |
45.625 |
98.401 |
0.449 |
| clpC | Streptococcus pneumoniae Rx1 |
45.625 |
98.401 |
0.449 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.5 |
98.401 |
0.448 |
| clpE | Streptococcus pneumoniae TIGR4 |
54.046 |
80.566 |
0.435 |
| clpE | Streptococcus pneumoniae Rx1 |
53.659 |
80.689 |
0.433 |
| clpE | Streptococcus pneumoniae D39 |
53.659 |
80.689 |
0.433 |
| clpE | Streptococcus pneumoniae R6 |
53.659 |
80.689 |
0.433 |
| clpE | Streptococcus mutans UA159 |
55.859 |
76.63 |
0.428 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
53.701 |
78.106 |
0.419 |