Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | KUE09_RS08395 | Genome accession | NZ_CP077801 |
| Coordinates | 1679391..1679771 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836910.1 | Uniprot ID | A0AAQ1AB09 |
| Organism | Acinetobacter baumannii strain 40288 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1674391..1684771
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KUE09_RS08365 (KUE09_08365) | kdsB | 1675294..1676055 (+) | 762 | WP_000680701.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| KUE09_RS08370 (KUE09_08370) | - | 1676067..1677047 (+) | 981 | WP_001075418.1 | DNA polymerase III subunit delta' | - |
| KUE09_RS08375 (KUE09_08375) | - | 1677059..1677400 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| KUE09_RS08380 (KUE09_08380) | - | 1677418..1678191 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| KUE09_RS08385 (KUE09_08385) | - | 1678229..1678837 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| KUE09_RS08390 (KUE09_08390) | - | 1678847..1679401 (+) | 555 | WP_000841379.1 | type II secretion system protein | - |
| KUE09_RS08395 (KUE09_08395) | xcpV | 1679391..1679771 (+) | 381 | WP_000836910.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| KUE09_RS08400 (KUE09_08400) | xcpW | 1679771..1680472 (+) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| KUE09_RS08405 (KUE09_08405) | gspK | 1680472..1681431 (+) | 960 | WP_000301481.1 | type II secretion system minor pseudopilin GspK | - |
| KUE09_RS08410 (KUE09_08410) | - | 1681661..1682257 (+) | 597 | WP_000908451.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| KUE09_RS08415 (KUE09_08415) | ung | 1682308..1683021 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| KUE09_RS08420 (KUE09_08420) | - | 1683018..1684142 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| KUE09_RS08425 (KUE09_08425) | tadA | 1684149..1684652 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13957.17 Da Isoelectric Point: 9.8004
>NTDB_id=582967 KUE09_RS08395 WP_000836910.1 1679391..1679771(+) (xcpV) [Acinetobacter baumannii strain 40288]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHIVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=582967 KUE09_RS08395 WP_000836910.1 1679391..1679771(+) (xcpV) [Acinetobacter baumannii strain 40288]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATAGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |