Detailed information NTG0582968

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: KUE09_RS08400
• Genome accession: NZ_CP077801
• Coordinates: 1679771..1680472 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain 40288
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1674771..1685472

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KUE09_RS08365 (KUE09_08365)	kdsB	1675294..1676055 (+)	762	WP_000680701.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
KUE09_RS08370 (KUE09_08370)	-	1676067..1677047 (+)	981	WP_001075418.1	DNA polymerase III subunit delta'	-
KUE09_RS08375 (KUE09_08375)	-	1677059..1677400 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
KUE09_RS08380 (KUE09_08380)	-	1677418..1678191 (+)	774	WP_000497298.1	TatD family hydrolase	-
KUE09_RS08385 (KUE09_08385)	-	1678229..1678837 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
KUE09_RS08390 (KUE09_08390)	-	1678847..1679401 (+)	555	WP_000841379.1	type II secretion system protein	-
KUE09_RS08395 (KUE09_08395)	xcpV	1679391..1679771 (+)	381	WP_000836910.1	type II secretion system minor pseudopilin GspI	Machinery gene
KUE09_RS08400 (KUE09_08400)	xcpW	1679771..1680472 (+)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
KUE09_RS08405 (KUE09_08405)	gspK	1680472..1681431 (+)	960	WP_000301481.1	type II secretion system minor pseudopilin GspK	-
KUE09_RS08410 (KUE09_08410)	-	1681661..1682257 (+)	597	WP_000908451.1	6-pyruvoyl trahydropterin synthase family protein	-
KUE09_RS08415 (KUE09_08415)	ung	1682308..1683021 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
KUE09_RS08420 (KUE09_08420)	-	1683018..1684142 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
KUE09_RS08425 (KUE09_08425)	tadA	1684149..1684652 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
KUE09_RS08430 (KUE09_08430)	-	1684722..1685165 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=582968 KUE09_RS08400 WP_000594572.1 1679771..1680472(+) (xcpW) [Acinetobacter baumannii strain 40288]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=582968 KUE09_RS08400 WP_000594572.1 1679771..1680472(+) (xcpW) [Acinetobacter baumannii strain 40288]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991