Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   KTR68_RS01695 Genome accession   NZ_CP077757
Coordinates   320591..321277 (+) Length   228 a.a.
NCBI ID   WP_072361794.1    Uniprot ID   -
Organism   Staphylococcus aureus strain WHC07     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 315591..326277
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KTR68_RS01655 yqeH 315855..316955 (+) 1101 WP_001280141.1 ribosome biogenesis GTPase YqeH -
  KTR68_RS01660 - 316985..317218 (+) 234 Protein_294 ribosome biogenesis GTPase YqeH -
  KTR68_RS01665 aroE 317232..318038 (+) 807 WP_000666761.1 shikimate dehydrogenase -
  KTR68_RS01670 yhbY 318042..318332 (+) 291 WP_000627815.1 ribosome assembly RNA-binding protein YhbY -
  KTR68_RS01675 nadD 318335..318904 (+) 570 WP_000725162.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  KTR68_RS01680 yqeK 318894..319478 (+) 585 WP_001019326.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  KTR68_RS01685 rsfS 319479..319832 (+) 354 WP_001088020.1 ribosome silencing factor -
  KTR68_RS01690 - 319835..320551 (+) 717 WP_000084822.1 class I SAM-dependent methyltransferase -
  KTR68_RS01695 comEA 320591..321277 (+) 687 WP_072361794.1 ComEA family DNA-binding protein Machinery gene
  KTR68_RS01700 - 321369..321830 (+) 462 WP_000439693.1 ComE operon protein 2 -
  KTR68_RS01705 comEC 321835..324036 (+) 2202 WP_025174327.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  KTR68_RS01710 holA 324093..325067 (+) 975 WP_031587652.1 DNA polymerase III subunit delta -
  KTR68_RS01715 rpsT 325112..325363 (-) 252 WP_001274017.1 30S ribosomal protein S20 -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25863.49 Da        Isoelectric Point: 9.3305

>NTDB_id=582779 KTR68_RS01695 WP_072361794.1 320591..321277(+) (comEA) [Staphylococcus aureus strain WHC07]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDTALKQSTSENSSLSKVEDVQVKDGDNSK
NKGPVYVDVKGAVKHPNVYKMTSKDRVVDLLDKAQLLEDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQIEVNSVHEKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=582779 KTR68_RS01695 WP_072361794.1 320591..321277(+) (comEA) [Staphylococcus aureus strain WHC07]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAAATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAAGTAGAAGATGTCCAGGTCAAAGATGGAGATAATTCCAAA
AATAAGGGTCCTGTATATGTCGATGTAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTGGAGGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATACCTCATAAAGGACAAAAGAATGTTGAACCACAAATTGAAGTAAACAGTGTGCACGAAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTTGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

98.678

99.561

0.982
  comEA Staphylococcus aureus N315

97.797

99.561

0.974