Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   KTE72_RS08505 Genome accession   NZ_CP077741
Coordinates   1746742..1747428 (-) Length   228 a.a.
NCBI ID   WP_001825349.1    Uniprot ID   -
Organism   Staphylococcus aureus strain NL1     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1741742..1752428
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KTE72_RS08485 (KTE72_08420) rpsT 1742656..1742907 (+) 252 WP_001274017.1 30S ribosomal protein S20 -
  KTE72_RS08490 (KTE72_08425) holA 1742952..1743926 (-) 975 WP_001282570.1 DNA polymerase III subunit delta -
  KTE72_RS08495 (KTE72_08430) comEC 1743983..1746184 (-) 2202 WP_001807826.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  KTE72_RS08500 (KTE72_08435) - 1746189..1746650 (-) 462 WP_000439690.1 ComE operon protein 2 -
  KTE72_RS08505 (KTE72_08440) comEA 1746742..1747428 (-) 687 WP_001825349.1 ComEA family DNA-binding protein Machinery gene
  KTE72_RS08510 (KTE72_08445) - 1747468..1748184 (-) 717 WP_000084838.1 class I SAM-dependent DNA methyltransferase -
  KTE72_RS08515 (KTE72_08450) rsfS 1748187..1748540 (-) 354 WP_001088020.1 ribosome silencing factor -
  KTE72_RS08520 (KTE72_08455) yqeK 1748541..1749125 (-) 585 WP_001019324.1 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK -
  KTE72_RS08525 (KTE72_08460) nadD 1749115..1749684 (-) 570 WP_000725164.1 nicotinate (nicotinamide) nucleotide adenylyltransferase -
  KTE72_RS08530 (KTE72_08465) yhbY 1749687..1749977 (-) 291 WP_000955234.1 ribosome assembly RNA-binding protein YhbY -
  KTE72_RS08535 (KTE72_08470) aroE 1749981..1750787 (-) 807 WP_000666746.1 shikimate dehydrogenase -
  KTE72_RS08540 (KTE72_08475) yqeH 1750801..1751901 (-) 1101 WP_001280151.1 ribosome biogenesis GTPase YqeH -

Sequence

Protein


Download         Length: 228 a.a.        Molecular weight: 25783.41 Da        Isoelectric Point: 9.3305

>NTDB_id=582621 KTE72_RS08505 WP_001825349.1 1746742..1747428(-) (comEA) [Staphylococcus aureus strain NL1]
MVLLYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRDFENKDTALKQSTSENSSLSKLEDVQVKDGDDSK
NKGPVYVDIKGAVKHPNVYKMTSKDRVVDLLDKAQLLDDADVSQINLSEKLTDQKMIFIPHKGQKNVEPQFGANSVHVKN
GNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQEIDDLKKVKGFGSKTFDKLKSYFTT

Nucleotide


Download         Length: 687 bp        

>NTDB_id=582621 KTE72_RS08505 WP_001825349.1 1746742..1747428(-) (comEA) [Staphylococcus aureus strain NL1]
GTGGTTTTATTGTATCAATTTTTATTACGCTATAAAGATTTTTTAACTCAATGGAAGTTATATATTATAAGTGCTGTTGT
TTTAATTATGGTATTAATTGGTTTTATATTCTGGAGACAAGATGATTATACTTCAAGAGATTTTGAAAATAAAGATACTG
CTCTGAAACAAAGCACTAGTGAAAATAGTAGTTTGTCCAAATTAGAAGATGTCCAGGTCAAAGATGGAGATGATTCCAAA
AATAAAGGTCCTGTATATGTCGATATAAAAGGTGCTGTTAAACATCCTAATGTTTATAAAATGACATCTAAGGATAGAGT
AGTTGATTTACTTGATAAAGCACAATTATTAGATGATGCAGATGTAAGTCAAATTAATTTGTCTGAAAAATTAACAGATC
AAAAAATGATTTTCATTCCTCATAAAGGACAAAAGAATGTTGAACCACAATTTGGAGCAAACAGTGTGCACGTAAAAAAT
GGGAACACAAATAATACTAAAGTAAATTTAAATACGGCATCTGTATCAGAATTGATGTCTGTTCCTGGAGTAGGGCAAGC
TAAAGCTAATGCAATTGTTGAATATCGCAACCAACAAGGTGCATTTCAAGAAATTGACGATTTGAAAAAAGTAAAAGGTT
TTGGAAGTAAAACTTTTGATAAACTGAAATCTTATTTCACGACATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(164-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Staphylococcus aureus MW2

96.476

99.561

0.961
  comEA Staphylococcus aureus N315

96.476

99.561

0.961