Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   VB13_RS08615 Genome accession   NZ_CP077685
Coordinates   1761757..1762533 (+) Length   258 a.a.
NCBI ID   WP_044555304.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain M49 591     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1756757..1767533
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  VB13_RS08595 (VB13_08855) - 1758379..1759359 (-) 981 WP_009880338.1 IS30 family transposase -
  VB13_RS08605 (VB13_08865) rlmH 1759754..1760233 (-) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  VB13_RS08610 (VB13_08870) htrA 1760445..1761668 (+) 1224 WP_009880337.1 S1C family serine protease Regulator
  VB13_RS08615 (VB13_08875) spo0J 1761757..1762533 (+) 777 WP_044555304.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29098.91 Da        Isoelectric Point: 10.2708

>NTDB_id=582261 VB13_RS08615 WP_044555304.1 1761757..1762533(+) (spo0J) [Streptococcus pyogenes strain M49 591]
MTKELLIDLPIEDIVTNPYQPRIQFNQRELQDLATSIKSNGLIQPIIVRKSDIFGYELVAGERRLKASKMAGLKKVPAII
KKISTLESMQQAIVENLQRSNLNAIEEAKAYQLLVEKKHMTHDEIAKYMGKSRPYISNTLRLLQLPAPIIKTIEEGKISA
GHARALLTLSDDKQQLYLTYKIQNEGLSVRQIEQLVTSTPSSKLSKKTKNIFATSLEKQLAKSLGLSVNMKLTANHSGYL
QISFSNDDELNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=582261 VB13_RS08615 WP_044555304.1 1761757..1762533(+) (spo0J) [Streptococcus pyogenes strain M49 591]
ATGACAAAAGAATTATTGATAGACCTACCAATTGAAGATATTGTTACAAATCCCTATCAGCCAAGGATACAATTTAATCA
AAGAGAACTCCAAGACCTAGCAACTTCTATTAAATCAAACGGCCTCATTCAACCTATTATTGTTCGAAAATCTGACATTT
TTGGCTATGAGTTAGTTGCTGGAGAACGACGACTTAAAGCTTCAAAAATGGCTGGTCTAAAAAAAGTTCCAGCTATTATC
AAGAAGATCTCTACACTCGAGAGCATGCAACAAGCTATAGTTGAAAATTTACAACGTTCTAACCTTAACGCTATCGAAGA
AGCTAAAGCCTATCAGTTATTGGTTGAAAAAAAACACATGACTCACGATGAGATTGCTAAATATATGGGAAAATCAAGAC
CTTATATTAGCAACACCTTACGTCTGTTACAACTCCCAGCACCTATCATTAAAACAATTGAAGAAGGAAAAATTAGTGCG
GGACACGCGCGTGCTCTTTTAACTTTGAGTGATGATAAGCAACAACTGTACCTCACTTATAAAATACAAAATGAAGGCCT
AAGTGTTAGGCAAATTGAGCAACTGGTTACTTCTACTCCAAGTTCGAAGCTATCTAAAAAAACTAAAAATATTTTTGCCA
CTTCTTTAGAGAAACAATTGGCTAAATCATTGGGACTCTCTGTCAATATGAAGCTGACAGCAAACCATAGTGGGTACCTT
CAGATATCTTTTTCCAATGATGATGAATTAAACAGAATTATCAACAAGCTAAAGTAG

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(9-96)

HTH domain found in ParB protein (HTH_ParB)

(148-197)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

58.366

99.612

0.581