Detailed information NTG0582053

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: MUK77_RS23660
• Genome accession: NZ_CP095086
• Coordinates: 4947247..4948272 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli isolate EC5654
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4942247..4953272

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUK77_RS23640 (MUK77_23640)	metJ	4943432..4943749 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
MUK77_RS23645 (MUK77_23645)	yiiX	4943809..4944417 (+)	609	WP_000702302.1	YiiX family permuted papain-like enzyme	-
MUK77_RS23650 (MUK77_23650)	rpmE	4944478..4944690 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
MUK77_RS23655 (MUK77_23655)	priA	4944893..4947091 (+)	2199	WP_001468126.1	primosomal protein N'	Machinery gene
MUK77_RS23660 (MUK77_23660)	cytR	4947247..4948272 (+)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
MUK77_RS23665 (MUK77_23665)	ftsN	4948364..4949323 (+)	960	WP_000068834.1	cell division protein FtsN	-
MUK77_RS23670 (MUK77_23670)	hslV	4949416..4949946 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
MUK77_RS23675 (MUK77_23675)	hslU	4949956..4951287 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
MUK77_RS23680 (MUK77_23680)	menA	4951354..4952280 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
MUK77_RS23685 (MUK77_23685)	rraA	4952373..4952858 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
MUK77_RS23690 (MUK77_23690)	zapB	4952943..4953188 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=582053 MUK77_RS23660 WP_000644911.1 4947247..4948272(+) (cytR) [Escherichia coli isolate EC5654]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=582053 MUK77_RS23660 WP_000644911.1 4947247..4948272(+) (cytR) [Escherichia coli isolate EC5654]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGACGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATCGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTAAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625