Detailed information NTG0582048

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: KTT68_RS01980
• Genome accession: NZ_CP077672
• Coordinates: 390726..391874 (+)
• Length: 382 a.a.
• NCBI ID: WP_029326229.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SWUJ1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 385726..396874

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KTT68_RS01960	-	386129..386812 (-)	684	WP_045206762.1	ABC transporter ATP-binding protein	-
KTT68_RS01965	-	386827..388257 (-)	1431	WP_224224029.1	ABC transporter permease	-
KTT68_RS01970	-	388470..389153 (+)	684	WP_007609386.1	response regulator transcription factor	-
KTT68_RS01975	-	389140..390567 (+)	1428	WP_224224030.1	HAMP domain-containing sensor histidine kinase	-
KTT68_RS01980	rapC	390726..391874 (+)	1149	WP_029326229.1	Rap family tetratricopeptide repeat protein	Regulator
KTT68_RS01985	phrC	391858..391977 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
KTT68_RS01990	-	392126..392236 (-)	111	WP_369878517.1	YjcZ family sporulation protein	-
KTT68_RS01995	-	392316..393680 (-)	1365	WP_020955323.1	aspartate kinase	-
KTT68_RS02000	ceuB	394094..395047 (+)	954	WP_015239156.1	ABC transporter permease	Machinery gene
KTT68_RS02005	-	395037..395984 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
KTT68_RS02010	-	395978..396736 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45406.59 Da
• Isoelectric Point: 4.9221

>NTDB_id=582048 KTT68_RS01980 WP_029326229.1 390726..391874(+) (rapC) [Bacillus velezensis strain SWUJ1]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFSYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=582048 KTT68_RS01980 WP_029326229.1 390726..391874(+) (rapC) [Bacillus velezensis strain SWUJ1]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGAGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCAGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568