Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   KTT68_RS01780 Genome accession   NZ_CP077672
Coordinates   332462..332860 (-) Length   132 a.a.
NCBI ID   WP_007609299.1    Uniprot ID   -
Organism   Bacillus velezensis strain SWUJ1     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 327462..337860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KTT68_RS01755 - 327667..328872 (+) 1206 WP_224224022.1 MFS transporter -
  KTT68_RS01760 - 329061..330263 (+) 1203 WP_224224023.1 GTP-binding protein -
  KTT68_RS01765 - 330328..331464 (+) 1137 WP_007609290.1 zinc-dependent alcohol dehydrogenase -
  KTT68_RS01770 - 331479..331913 (+) 435 WP_224224024.1 RDD family protein -
  KTT68_RS01775 - 332030..332308 (+) 279 WP_263612330.1 YckD family protein -
  KTT68_RS01780 nin/comJ 332462..332860 (-) 399 WP_007609299.1 competence protein ComJ Regulator
  KTT68_RS01785 nucA/comI 332881..333318 (-) 438 WP_038456921.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  KTT68_RS01790 hxlB 333676..334233 (-) 558 WP_038456922.1 6-phospho-3-hexuloisomerase -
  KTT68_RS01795 hxlA 334230..334865 (-) 636 WP_221664223.1 3-hexulose-6-phosphate synthase -
  KTT68_RS01800 - 335097..335459 (+) 363 WP_007409352.1 helix-turn-helix domain-containing protein -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14977.03 Da        Isoelectric Point: 4.9712

>NTDB_id=582045 KTT68_RS01780 WP_007609299.1 332462..332860(-) (nin/comJ) [Bacillus velezensis strain SWUJ1]
MIKSWKPQELAISYHQFTIFQKDSEPPVIDWTDEAIEKGYAEADGAVSFEARRNTRAFIVLRLNTSEPVPSYEKKATVPF
EAVKDGIEIESVMSKRLFFHIPKGRYSLTCYSVPAEISDLHADTYIIDAAAM

Nucleotide


Download         Length: 399 bp        

>NTDB_id=582045 KTT68_RS01780 WP_007609299.1 332462..332860(-) (nin/comJ) [Bacillus velezensis strain SWUJ1]
TTGATTAAATCATGGAAACCGCAAGAACTGGCCATTTCTTATCATCAATTTACAATCTTCCAAAAAGATTCAGAACCGCC
TGTTATCGATTGGACCGATGAAGCCATTGAAAAAGGATATGCGGAAGCTGACGGAGCTGTTTCATTTGAGGCAAGGAGAA
ATACGAGGGCATTTATCGTTCTCAGGCTTAACACAAGTGAACCGGTACCATCCTATGAGAAAAAAGCGACTGTTCCCTTT
GAGGCTGTAAAAGATGGAATTGAGATTGAAAGCGTGATGTCAAAGCGGCTTTTCTTTCATATTCCGAAAGGCCGATACAG
CCTTACCTGTTATTCAGTGCCTGCCGAAATATCCGATCTTCATGCGGATACGTATATTATTGATGCAGCCGCAATGTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

75.758

100

0.758