Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsX   Type   Machinery gene
Locus tag   KTN75_RS08150 Genome accession   NZ_CP077635
Coordinates   1576686..1577273 (-) Length   195 a.a.
NCBI ID   WP_002934760.1    Uniprot ID   -
Organism   Campylobacter jejuni strain R19.1007     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1571686..1582273
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KTN75_RS08130 (KTN75_08130) - 1572434..1573198 (+) 765 WP_002851318.1 TIGR02757 family protein -
  KTN75_RS08135 (KTN75_08135) - 1573202..1573966 (+) 765 WP_002855821.1 TSUP family transporter -
  KTN75_RS08140 (KTN75_08140) ctsF 1573959..1575140 (-) 1182 WP_002868229.1 type II secretion system F family protein Machinery gene
  KTN75_RS08145 (KTN75_08145) ctsE 1575137..1576696 (-) 1560 WP_032597243.1 GspE/PulE family protein Machinery gene
  KTN75_RS08150 (KTN75_08150) ctsX 1576686..1577273 (-) 588 WP_002934760.1 hypothetical protein Machinery gene
  KTN75_RS08155 (KTN75_08155) ctsP 1577277..1577885 (-) 609 WP_002851464.1 ATP-binding protein Machinery gene
  KTN75_RS08160 (KTN75_08160) ctsD 1577878..1579290 (-) 1413 WP_002856543.1 pilus (MSHA type) biogenesis protein MshL Machinery gene
  KTN75_RS08165 (KTN75_08165) ctsR 1579268..1579579 (-) 312 WP_002855438.1 hypothetical protein Machinery gene

Sequence

Protein


Download         Length: 195 a.a.        Molecular weight: 23387.48 Da        Isoelectric Point: 9.8409

>NTDB_id=581785 KTN75_RS08150 WP_002934760.1 1576686..1577273(-) (ctsX) [Campylobacter jejuni strain R19.1007]
MQERIKELELRYKYFLLKKYLKYLLLIILISVIAFCFFVLMQKYNKQKNIYLQAIEHKKHLEQKILQAQILQEKNKISRE
KLYKELEEVKVVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWALKANELDKQKQDSW
LIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK

Nucleotide


Download         Length: 588 bp        

>NTDB_id=581785 KTN75_RS08150 WP_002934760.1 1576686..1577273(-) (ctsX) [Campylobacter jejuni strain R19.1007]
ATGCAAGAAAGAATTAAAGAGCTTGAGCTTAGGTATAAATACTTTTTACTTAAAAAATATTTAAAATATTTATTATTAAT
TATTCTAATATCAGTAATAGCATTTTGTTTTTTTGTGCTAATGCAAAAATATAATAAGCAAAAAAATATTTATTTGCAAG
CTATTGAACATAAAAAGCATTTGGAGCAAAAGATTCTTCAAGCGCAAATTTTACAAGAAAAAAATAAGATTTCTAGGGAA
AAGTTATATAAAGAACTAGAAGAAGTTAAAGTGGTGCAGGAAAATACACATATTAGCAAGATAGAAATTGATTCTAAAAT
TTTAAATATTTCTGATTTAAAAAAATCTTTTTATCAAAATCCAAGCTATGAAAAGGCATTAAATTTAGCTAAGAAGTATT
TTGATATTAAAGCTTATCAAAAGACAATATTTTGGGCTTTAAAAGCCAATGAACTTGACAAGCAAAAACAAGATTCTTGG
CTGATTTTTGCTCAGGCTAAAAGAGCTTTAGGCGAAGAAAAAGAAGCTCAAAGTGCTTTAGATGCTTATATAAATTATTA
TGGTTTAATGGAATTAGATGGAAAGTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsX Campylobacter jejuni subsp. jejuni 81-176

99.487

100

0.995