Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   KTN74_RS02905 Genome accession   NZ_CP077633
Coordinates   545333..545983 (-) Length   216 a.a.
NCBI ID   WP_057097325.1    Uniprot ID   -
Organism   Campylobacter jejuni strain R16.2162     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 540333..550983
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KTN74_RS02870 (KTN74_02870) - 540711..541715 (+) 1005 WP_217315745.1 hypothetical protein -
  KTN74_RS02875 (KTN74_02875) tlyA 541712..542473 (+) 762 WP_057100961.1 TlyA family RNA methyltransferase -
  KTN74_RS02880 (KTN74_02880) ribF 542439..543293 (+) 855 WP_057097327.1 bifunctional riboflavin kinase/FAD synthetase -
  KTN74_RS02885 (KTN74_02885) cmoA 543280..543990 (+) 711 WP_002859101.1 carboxy-S-adenosyl-L-methionine synthase CmoA -
  KTN74_RS02890 (KTN74_02890) - 543980..544201 (-) 222 WP_002859102.1 EexN family lipoprotein -
  KTN74_RS02895 (KTN74_02895) - 544198..544632 (-) 435 WP_032590819.1 EexN family lipoprotein -
  KTN74_RS02900 (KTN74_02900) - 544690..545322 (-) 633 WP_002852232.1 trimeric intracellular cation channel family protein -
  KTN74_RS02905 (KTN74_02905) CJE0566 545333..545983 (-) 651 WP_057097325.1 DNA/RNA non-specific endonuclease Regulator
  KTN74_RS02910 (KTN74_02910) nth 545980..546606 (-) 627 WP_002852225.1 endonuclease III -
  KTN74_RS02915 (KTN74_02915) peb4 546687..547508 (+) 822 WP_002852119.1 peptidylprolyl isomerase PEB4 -
  KTN74_RS02920 (KTN74_02920) fbaA 547508..548572 (+) 1065 WP_002852272.1 class II fructose-bisphosphate aldolase -
  KTN74_RS02925 (KTN74_02925) - 548667..550109 (+) 1443 WP_002852205.1 MotA/TolQ/ExbB proton channel family protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25533.27 Da        Isoelectric Point: 9.7429

>NTDB_id=581739 KTN74_RS02905 WP_057097325.1 545333..545983(-) (CJE0566) [Campylobacter jejuni strain R16.2162]
MKIFIFLLTISLNIFALEPYKPSADFSSYFNNINCSQILDKFFYLNCYDYKLKGTKAVAYKVEASNLKDRQIKKRPRFED
DTNIPKKYRTTWSDYKNSGYTRGHTAPNASFSFSKAAQNSVFLMSNITPQIAQINNKIWNEIEQRERNLAFKFQSIEVLN
LVLYDKEPQYIKNRIAIPSFYVKIIKTPKFKECYQVPNHEVNDENIKQYQINCDKF

Nucleotide


Download         Length: 651 bp        

>NTDB_id=581739 KTN74_RS02905 WP_057097325.1 545333..545983(-) (CJE0566) [Campylobacter jejuni strain R16.2162]
ATGAAAATTTTCATCTTTTTACTCACTATATCTCTTAATATTTTTGCCTTAGAACCTTACAAGCCTAGTGCTGATTTTTC
TTCTTATTTTAACAATATAAATTGCTCGCAAATCTTAGATAAGTTTTTTTATCTAAATTGCTATGATTATAAACTCAAAG
GCACAAAAGCCGTTGCTTATAAGGTAGAAGCTTCAAATTTGAAAGATAGACAAATCAAAAAACGCCCTCGCTTTGAAGAT
GATACAAATATTCCTAAAAAATACCGCACTACTTGGAGTGATTATAAAAACAGTGGTTACACACGAGGACACACTGCGCC
TAATGCTTCTTTTAGCTTTAGTAAAGCTGCTCAAAATTCAGTATTTTTAATGAGTAATATTACCCCACAAATTGCACAAA
TAAATAATAAAATTTGGAATGAAATCGAGCAAAGAGAAAGAAATTTGGCTTTCAAATTTCAAAGTATCGAAGTTTTAAAT
TTAGTACTTTACGATAAAGAACCACAATACATTAAAAACCGTATTGCTATACCAAGTTTTTATGTAAAAATTATTAAAAC
TCCGAAATTTAAAGAATGCTATCAAGTACCAAACCATGAAGTAAATGATGAAAATATTAAACAGTATCAAATAAATTGTG
ATAAATTTTAA

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(34-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

70.558

91.204

0.644
  CJE1441 Campylobacter jejuni RM1221

69.543

91.204

0.634