Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   JGX27_RS11285 Genome accession   NZ_CP077423
Coordinates   2257024..2257800 (+) Length   258 a.a.
NCBI ID   WP_009855222.1    Uniprot ID   A0AA36K0A4
Organism   Streptococcus gallolyticus subsp. gallolyticus TX20005     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2252024..2262800
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JGX27_RS11275 (JGX27_11275) rlmH 2254999..2255478 (-) 480 WP_009855220.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  JGX27_RS11280 (JGX27_11280) htrA 2255689..2256954 (+) 1266 WP_013643604.1 trypsin-like peptidase domain-containing protein Regulator
  JGX27_RS11285 (JGX27_11285) spo0J 2257024..2257800 (+) 777 WP_009855222.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 29712.54 Da        Isoelectric Point: 9.7762

>NTDB_id=581536 JGX27_RS11285 WP_009855222.1 2257024..2257800(+) (spo0J) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
MPETLILIKIENISPNPYQPRLEFKQEELEELARSIKTNGLIQPIIVRESTVFGYELIAGERRLRASKMAGLTEIPAIIK
NISNQESMQLAIVENLQRSDLNPIEEAKAYQQLLEKNQMTHEELAQFMGKSRPYITNCLRLLNLPKSLSDAVEKGELSQG
HARVLLTLKNAEEQEKWYQKILTEDISVRKLEHLLKPAKKKKNRPKKKDIFIRNQEEELTKQLGLPVKIIVSKTGTKGEV
SLHFQSEEDLNRIINKLK

Nucleotide


Download         Length: 777 bp        

>NTDB_id=581536 JGX27_RS11285 WP_009855222.1 2257024..2257800(+) (spo0J) [Streptococcus gallolyticus subsp. gallolyticus TX20005]
ATGCCTGAAACACTCATATTAATCAAAATTGAAAATATCTCACCTAATCCCTACCAACCCCGTTTAGAATTTAAACAAGA
AGAGCTAGAAGAACTAGCACGTTCGATTAAAACTAATGGGCTTATTCAGCCGATTATCGTCCGAGAATCAACTGTCTTTG
GTTATGAGCTTATTGCCGGTGAAAGACGTCTAAGAGCCTCAAAAATGGCAGGTTTAACCGAAATTCCTGCTATCATAAAA
AATATCTCCAATCAGGAGAGCATGCAGCTGGCTATCGTTGAAAATTTGCAACGTTCTGATTTAAATCCAATCGAAGAAGC
AAAAGCTTACCAGCAACTTCTGGAAAAAAATCAAATGACCCATGAAGAATTAGCACAATTTATGGGAAAATCTCGCCCCT
ACATTACCAATTGCCTCAGATTACTTAACCTTCCTAAAAGTCTCTCTGATGCCGTTGAAAAAGGTGAGCTGTCTCAAGGA
CACGCGCGTGTTCTTTTAACCCTTAAAAATGCTGAAGAACAAGAAAAGTGGTATCAAAAAATTCTGACAGAGGATATTAG
CGTTAGAAAACTTGAACATTTACTAAAACCTGCTAAAAAGAAAAAAAATCGTCCCAAAAAGAAAGATATTTTCATTCGAA
ATCAAGAAGAAGAATTGACCAAACAGTTAGGACTTCCTGTTAAAATTATCGTCTCTAAAACTGGCACAAAAGGAGAGGTG
AGTTTACATTTTCAATCTGAAGAAGACTTAAACAGAATTATCAACAAGCTAAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(149-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

59.533

99.612

0.593