Detailed information NTG0581305

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: I6L88_RS04580
• Genome accession: NZ_CP077404
• Coordinates: 925914..927146 (-)
• Length: 410 a.a.
• NCBI ID: WP_002262816.1
• Uniprot ID: A0AAX1K4W9
• Organism: Streptococcus mutans strain FDAARGOS 1458
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 920914..932146

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L88_RS04560 (I6L88_04560)	-	921243..922505 (+)	1263	WP_002280024.1	PLP-dependent aminotransferase family protein	-
I6L88_RS04565 (I6L88_04565)	mmuM	922639..923589 (-)	951	WP_002264316.1	homocysteine S-methyltransferase	-
I6L88_RS04570 (I6L88_04570)	-	923599..924976 (-)	1378	Protein_896	amino acid permease	-
I6L88_RS04575 (I6L88_04575)	yihA	925305..925898 (-)	594	WP_002262817.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
I6L88_RS04580 (I6L88_04580)	clpX	925914..927146 (-)	1233	WP_002262816.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
I6L88_RS04585 (I6L88_04585)	-	927171..927341 (-)	171	WP_002262815.1	hypothetical protein	-
I6L88_RS04590 (I6L88_04590)	-	927359..927871 (-)	513	WP_002262814.1	dihydrofolate reductase	-
I6L88_RS04595 (I6L88_04595)	pnuC	927956..928735 (-)	780	WP_002266473.1	nicotinamide riboside transporter PnuC	-
I6L88_RS04600 (I6L88_04600)	-	928852..929691 (-)	840	WP_002264319.1	thymidylate synthase	-
I6L88_RS04605 (I6L88_04605)	-	929899..931074 (+)	1176	WP_002267988.1	hydroxymethylglutaryl-CoA synthase	-

Sequence

Protein

• Length: 410 a.a.
• Molecular weight: 45181.65 Da
• Isoelectric Point: 4.4495

>NTDB_id=581305 I6L88_RS04580 WP_002262816.1 925914..927146(-) (clpX) [Streptococcus mutans strain FDAARGOS 1458]
MAGNRTNDVTVHCSFCGKNQDEVKKIIAGNGVFICNECVELSQEIIREELAEEVLADLSEVPKPKELLAILDSYVIGQDR
AKRALAVAVYNHYKRISFTESQDDQDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATALTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPQQEMIQIDTK
NILFIVGGAFDGIEDIVKQRLGEKIIGFGQNNKKIDDQSSYMQEIISEDIQKFGLIPEFIGRLPVLAALEQLTVDDLVKI
LTEPKNALVKQYQTLLSYDGVELEFDQEALQAIAQKAIERKTGARGLRSIIEETMLDLMFEIPSQEDVTCVRITKKAVEG
TDKPILETAS

Nucleotide

• Length: 1233 bp

>NTDB_id=581305 I6L88_RS04580 WP_002262816.1 925914..927146(-) (clpX) [Streptococcus mutans strain FDAARGOS 1458]
ATGGCTGGAAATAGAACCAATGATGTCACAGTGCATTGTTCATTCTGTGGCAAAAATCAAGATGAAGTTAAAAAAATTAT
TGCAGGTAATGGCGTTTTTATTTGCAATGAATGTGTTGAATTATCACAAGAAATTATCCGTGAAGAACTAGCAGAAGAGG
TATTGGCTGATCTTTCAGAAGTTCCAAAACCAAAAGAATTGTTGGCAATACTAGACAGTTATGTTATCGGTCAGGACCGT
GCCAAACGTGCTTTAGCAGTTGCTGTCTATAATCATTATAAGCGTATCAGTTTTACTGAGAGCCAAGACGACCAAGATGT
TGACTTACAAAAATCAAATATTCTTATGATTGGACCGACAGGTTCTGGAAAAACTTTCTTAGCACAGACTTTGGCTAAGA
GTCTCAATGTGCCCTTTGCTATTGCTGATGCAACAGCCTTGACTGAAGCGGGTTATGTAGGTGAAGATGTTGAAAACATT
TTGCTTAAATTGATTCAGGCAGCTGATTATAATGTTGAACGCGCGGAGCGTGGCATCATTTATGTTGATGAAATTGATAA
GATTGCTAAAAAAGGCGAAAATGTTTCCATCACACGTGATGTATCTGGTGAAGGTGTCCAACAAGCTCTGCTTAAGATTA
TTGAAGGAACAGTAGCTAGTGTGCCACCACAAGGTGGTCGGAAACATCCCCAACAGGAAATGATTCAAATTGATACGAAA
AACATCCTCTTCATAGTTGGTGGCGCTTTTGATGGTATTGAAGATATCGTTAAACAGCGTTTGGGTGAGAAAATTATTGG
CTTTGGTCAAAATAATAAGAAGATTGATGATCAATCTTCTTATATGCAAGAAATTATTTCAGAAGACATTCAAAAATTTG
GTCTTATTCCAGAGTTTATTGGTCGTTTGCCAGTTTTAGCTGCGCTTGAGCAATTAACGGTTGATGATTTGGTTAAGATT
TTGACAGAACCTAAAAATGCTTTAGTTAAACAATATCAGACGCTTTTATCTTATGATGGTGTTGAGCTTGAGTTTGATCA
AGAGGCGCTTCAAGCGATTGCTCAAAAGGCGATTGAACGTAAGACAGGCGCACGCGGTCTTCGCTCTATTATTGAAGAAA
CGATGCTGGATCTGATGTTTGAAATTCCGAGTCAAGAGGATGTCACTTGCGTTCGCATTACTAAGAAAGCGGTAGAAGGG
ACCGACAAACCTATTCTTGAGACAGCTTCCTAA

Domains

Predicted by InterproScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-388)

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	100	100	1
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.102	97.805	0.578