Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | I6L88_RS00055 | Genome accession | NZ_CP077404 |
| Coordinates | 11903..12856 (+) | Length | 317 a.a. |
| NCBI ID | WP_002264244.1 | Uniprot ID | A0AAX1K2T6 |
| Organism | Streptococcus mutans strain FDAARGOS 1458 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6903..17856
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L88_RS00015 (I6L88_00015) | - | 7669..8052 (+) | 384 | WP_002264248.1 | DUF1033 family protein | - |
| I6L88_RS00020 (I6L88_00020) | comYA | 8182..9123 (+) | 942 | WP_002264247.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| I6L88_RS00025 (I6L88_00025) | comYB | 9059..10090 (+) | 1032 | WP_255262721.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| I6L88_RS00030 (I6L88_00030) | comYC | 10090..10404 (+) | 315 | WP_002263437.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| I6L88_RS00035 (I6L88_00035) | comYD | 10391..10795 (+) | 405 | WP_002264246.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| I6L88_RS00040 (I6L88_00040) | comYE | 10767..11060 (+) | 294 | WP_002263439.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| I6L88_RS00045 (I6L88_00045) | comYF | 11047..11481 (+) | 435 | WP_002264245.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| I6L88_RS00050 (I6L88_00050) | comYG | 11459..11848 (+) | 390 | WP_002263441.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| I6L88_RS00055 (I6L88_00055) | comYH | 11903..12856 (+) | 954 | WP_002264244.1 | class I SAM-dependent methyltransferase | Machinery gene |
| I6L88_RS00060 (I6L88_00060) | - | 12915..14114 (+) | 1200 | WP_002263443.1 | acetate kinase | - |
| I6L88_RS00065 (I6L88_00065) | - | 14667..14912 (+) | 246 | WP_002263444.1 | helix-turn-helix transcriptional regulator | - |
| I6L88_RS00070 (I6L88_00070) | - | 14881..15321 (+) | 441 | WP_002263445.1 | hypothetical protein | - |
| I6L88_RS00075 (I6L88_00075) | - | 15374..16036 (+) | 663 | WP_002266816.1 | CPBP family intramembrane glutamic endopeptidase | - |
| I6L88_RS00080 (I6L88_00080) | proC | 16122..16892 (-) | 771 | WP_002267840.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36258.54 Da Isoelectric Point: 5.2379
>NTDB_id=581278 I6L88_RS00055 WP_002264244.1 11903..12856(+) (comYH) [Streptococcus mutans strain FDAARGOS 1458]
MDFEKIEAAYNLLLDNCQRLETQLHTHLYDALIEQNACYLGAEGADDFIKENNKKLRQLNLSKEEWRRSFQFIFIKATQS
QQLQSNHQFTPDSIGFIILYLLEGLTNKSQLDIIEIGSGTGNLAETIVNNSSKSIDYMGIEVDDLLIDLSASIADVLDSS
VHFVQEDAVRPQILKESDVIISDLPVGFYPNDKIAQRYQVAAKLGHTYAHHLLMEQSLKYLKKEGLAIFLAPVDLLTSEQ
SPLLKKWLQNNVTILAVISLPEAIFKQKSNIKSIFVLKKQSQQSLESFVYPLTDLQDPEVLRRFMKNFKKWKEDNVF
MDFEKIEAAYNLLLDNCQRLETQLHTHLYDALIEQNACYLGAEGADDFIKENNKKLRQLNLSKEEWRRSFQFIFIKATQS
QQLQSNHQFTPDSIGFIILYLLEGLTNKSQLDIIEIGSGTGNLAETIVNNSSKSIDYMGIEVDDLLIDLSASIADVLDSS
VHFVQEDAVRPQILKESDVIISDLPVGFYPNDKIAQRYQVAAKLGHTYAHHLLMEQSLKYLKKEGLAIFLAPVDLLTSEQ
SPLLKKWLQNNVTILAVISLPEAIFKQKSNIKSIFVLKKQSQQSLESFVYPLTDLQDPEVLRRFMKNFKKWKEDNVF
Nucleotide
Download Length: 954 bp
>NTDB_id=581278 I6L88_RS00055 WP_002264244.1 11903..12856(+) (comYH) [Streptococcus mutans strain FDAARGOS 1458]
ATGGATTTTGAAAAAATAGAAGCTGCCTATAACTTACTGTTAGATAATTGTCAAAGGCTGGAAACTCAACTTCATACTCA
CCTTTATGATGCCTTAATTGAGCAAAATGCTTGCTATCTAGGTGCTGAAGGTGCTGATGATTTTATTAAAGAAAATAATA
AAAAACTGCGTCAGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTAGTTTTCAATTTATTTTTATTAAGGCTACTCAAAGT
CAGCAATTACAGTCAAATCACCAATTTACACCAGATAGTATTGGTTTTATTATTCTTTATTTATTGGAAGGTTTAACAAA
TAAGAGTCAGTTAGACATCATTGAAATTGGTTCTGGGACAGGAAATCTTGCAGAGACTATTGTGAATAACAGTTCAAAAA
GCATTGATTATATGGGGATTGAGGTTGATGATCTGTTAATTGATTTATCAGCAAGTATTGCCGATGTATTGGATTCTTCT
GTGCATTTTGTTCAAGAAGATGCAGTGCGGCCTCAGATTTTAAAAGAAAGTGATGTCATTATCAGTGATCTGCCAGTTGG
CTTTTATCCCAATGATAAAATTGCTCAGCGTTATCAGGTTGCAGCCAAGTTAGGACATACTTATGCACATCATCTTTTGA
TGGAGCAATCGCTTAAGTATTTAAAAAAAGAGGGACTTGCTATTTTTTTAGCGCCAGTGGATCTTTTAACTAGTGAGCAG
AGTCCTTTGCTTAAAAAGTGGTTACAGAACAATGTAACTATTTTAGCCGTTATTTCTTTACCTGAGGCAATTTTTAAACA
GAAAAGTAATATAAAGTCAATCTTTGTCTTAAAGAAACAATCGCAACAAAGTTTGGAAAGTTTTGTCTATCCTTTGACAG
ATTTACAAGACCCCGAAGTTTTAAGACGATTTATGAAAAATTTTAAAAAGTGGAAGGAAGATAATGTCTTTTAA
ATGGATTTTGAAAAAATAGAAGCTGCCTATAACTTACTGTTAGATAATTGTCAAAGGCTGGAAACTCAACTTCATACTCA
CCTTTATGATGCCTTAATTGAGCAAAATGCTTGCTATCTAGGTGCTGAAGGTGCTGATGATTTTATTAAAGAAAATAATA
AAAAACTGCGTCAGCTTAATCTAAGTAAAGAGGAGTGGCGTCGTAGTTTTCAATTTATTTTTATTAAGGCTACTCAAAGT
CAGCAATTACAGTCAAATCACCAATTTACACCAGATAGTATTGGTTTTATTATTCTTTATTTATTGGAAGGTTTAACAAA
TAAGAGTCAGTTAGACATCATTGAAATTGGTTCTGGGACAGGAAATCTTGCAGAGACTATTGTGAATAACAGTTCAAAAA
GCATTGATTATATGGGGATTGAGGTTGATGATCTGTTAATTGATTTATCAGCAAGTATTGCCGATGTATTGGATTCTTCT
GTGCATTTTGTTCAAGAAGATGCAGTGCGGCCTCAGATTTTAAAAGAAAGTGATGTCATTATCAGTGATCTGCCAGTTGG
CTTTTATCCCAATGATAAAATTGCTCAGCGTTATCAGGTTGCAGCCAAGTTAGGACATACTTATGCACATCATCTTTTGA
TGGAGCAATCGCTTAAGTATTTAAAAAAAGAGGGACTTGCTATTTTTTTAGCGCCAGTGGATCTTTTAACTAGTGAGCAG
AGTCCTTTGCTTAAAAAGTGGTTACAGAACAATGTAACTATTTTAGCCGTTATTTCTTTACCTGAGGCAATTTTTAAACA
GAAAAGTAATATAAAGTCAATCTTTGTCTTAAAGAAACAATCGCAACAAAGTTTGGAAAGTTTTGTCTATCCTTTGACAG
ATTTACAAGACCCCGAAGTTTTAAGACGATTTATGAAAAATTTTAAAAAGTGGAAGGAAGATAATGTCTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA159 |
99.685 |
100 |
0.997 |
| comYH | Streptococcus mutans UA140 |
99.685 |
100 |
0.997 |