Detailed information NTG0581207

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: I6L25_RS18500
• Genome accession: NZ_CP077398
• Coordinates: 3012530..3013390 (+)
• Length: 286 a.a.
• NCBI ID: WP_004710834.1
• Uniprot ID: A0AB36M6L9
• Organism: Acinetobacter nosocomialis strain FDAARGOS 1395
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3007530..3018390

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L25_RS14055 (I6L25_14055)	secG	3008137..3008466 (-)	330	WP_002156913.1	preprotein translocase subunit SecG	-
I6L25_RS14060 (I6L25_14060)	tpiA	3008479..3009273 (-)	795	WP_004710827.1	triose-phosphate isomerase	-
I6L25_RS14065 (I6L25_14065)	pilB	3009564..3011276 (+)	1713	WP_004710829.1	type IV-A pilus assembly ATPase PilB	Machinery gene
I6L25_RS14070 (I6L25_14070)	pilC	3011304..3012530 (+)	1227	WP_004710832.1	type II secretion system F family protein	Machinery gene
I6L25_RS18500 (I6L25_14075)	pilD	3012530..3013390 (+)	861	WP_004710834.1	prepilin peptidase	Machinery gene
I6L25_RS14080 (I6L25_14080)	coaE	3013392..3013988 (+)	597	WP_000874125.1	dephospho-CoA kinase	-
I6L25_RS14085 (I6L25_14085)	-	3013985..3014899 (-)	915	WP_004710837.1	DMT family transporter	-
I6L25_RS14090 (I6L25_14090)	rlmB	3014935..3015684 (-)	750	WP_002156969.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
I6L25_RS14095 (I6L25_14095)	-	3015786..3016112 (-)	327	WP_000099685.1	pyrimidine/purine nucleoside phosphorylase	-
I6L25_RS14100 (I6L25_14100)	-	3016189..3017499 (-)	1311	WP_004710840.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32121.54 Da
• Isoelectric Point: 7.1784

>NTDB_id=581207 I6L25_RS18500 WP_004710834.1 3012530..3013390(+) (pilD) [Acinetobacter nosocomialis strain FDAARGOS 1395]
MQDIIAYFIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIDHEKLTLSKPASSCPACHQP
IRWYQNIPLISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMVFGPTIQMLFGLVLTWILIALTFIDFDTQLLPDR
FTLPLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=581207 I6L25_RS18500 WP_004710834.1 3012530..3013390(+) (pilD) [Acinetobacter nosocomialis strain FDAARGOS 1395]
ATGCAAGACATCATTGCGTATTTTATTCAAAACTTAACTGCACTTTATATTGCTGTTGCACTCGTGAGCCTATGTATCGG
TAGCTTTCTTAATGTAGTGATTTACCGCACACCAAGAATGATGGAGCAAGATTGGCAGCAAGAATGCCAAATGTTACTCA
ATCCTGAGCAACCCATTATTGATCATGAGAAGCTAACTTTAAGTAAGCCTGCTTCATCATGCCCTGCATGCCATCAACCC
ATCCGTTGGTATCAAAATATCCCACTCATAAGCTGGCTAGTGTTAAGAGGAAAATGTGGTCATTGCCAGCACCCGATTAG
CATTCGCTATCCAGCCATCGAACTACTTACCATGCTATGTTCATTGGTGGTGGTTATGGTGTTTGGTCCAACCATACAAA
TGCTTTTTGGACTCGTCCTCACATGGATATTGATAGCACTTACCTTTATTGATTTCGATACACAATTATTGCCTGATCGC
TTTACCCTACCTTTAGCTGCGCTTGGTTTAGGCATTAACACCTTTAATATCTACACCTCACCCAACTCGGCCATTTGGGG
TTACCTCATTGGTTTTCTATGTCTTTGGATTGTCTATTACTTATTTAAAGTAATTACTGGCAAAGAAGGTATGGGCTACG
GCGACTTTAAATTACTTGCAGCATTAGGTGCATGGATGGGGCCATTGATGCTGCCGTTAATTGTGTTATTGTCATCGTTA
CTTGGCGCAATCATTGGCATCATTTTATTAAAATTAAGAAATGACAATCAGCCTTTTGCGTTTGGGCCATATATTGCCAT
TGCAGGTTGGGTTGCCTTTTTATGGGGTGATCAGATTATGAAAATTTATTTGGGAGGTTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (138-247)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (22-128)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	99.65	100	0.997
pilD	Acinetobacter baumannii D1279779	97.902	100	0.979
pilD	Vibrio cholerae strain A1552	53.309	95.105	0.507
pilD	Vibrio campbellii strain DS40M4	51.661	94.755	0.49
pilD	Neisseria gonorrhoeae MS11	47.727	92.308	0.441