Detailed information
Overview
| Name | pptB | Type | Regulator |
| Locus tag | STO1_RS07940 | Genome accession | NZ_AP018338 |
| Coordinates | 1538465..1539514 (-) | Length | 349 a.a. |
| NCBI ID | WP_096422735.1 | Uniprot ID | - |
| Organism | Streptococcus oralis subsp. tigurinus strain osk_001 | ||
| Function | export ComS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1533465..1544514
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STO1_RS07910 (STO1_015160) | - | 1534599..1534898 (-) | 300 | WP_057489397.1 | YlxQ-related RNA-binding protein | - |
| STO1_RS07915 (STO1_015170) | rnpM | 1534891..1535184 (-) | 294 | WP_000857560.1 | RNase P modulator RnpM | - |
| STO1_RS07920 (STO1_015180) | nusA | 1535206..1536342 (-) | 1137 | WP_000032278.1 | transcription termination factor NusA | - |
| STO1_RS07925 (STO1_015190) | rimP | 1536385..1536864 (-) | 480 | WP_084911995.1 | ribosome maturation factor RimP | - |
| STO1_RS07930 (STO1_015200) | trmB | 1536991..1537626 (-) | 636 | WP_096422733.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| STO1_RS07935 (STO1_015210) | ccrZ | 1537623..1538417 (-) | 795 | WP_000363023.1 | cell cycle regulator CcrZ | - |
| STO1_RS07940 (STO1_015220) | pptB | 1538465..1539514 (-) | 1050 | WP_096422735.1 | ABC transporter permease | Regulator |
| STO1_RS07945 (STO1_015230) | pptA | 1539511..1540242 (-) | 732 | WP_096422737.1 | ABC transporter ATP-binding protein | Regulator |
| STO1_RS07950 (STO1_015240) | - | 1540310..1540720 (+) | 411 | WP_096422739.1 | HIT family protein | - |
| STO1_RS07955 (STO1_015250) | - | 1540730..1541017 (+) | 288 | WP_096422741.1 | hypothetical protein | - |
| STO1_RS07960 (STO1_015260) | - | 1541085..1541738 (+) | 654 | WP_172843652.1 | hypothetical protein | - |
| STO1_RS07965 (STO1_015270) | dnaJ | 1541816..1542952 (-) | 1137 | WP_001066316.1 | molecular chaperone DnaJ | - |
Sequence
Protein
Download Length: 349 a.a. Molecular weight: 40241.09 Da Isoelectric Point: 9.9307
>NTDB_id=58100 STO1_RS07940 WP_096422735.1 1538465..1539514(-) (pptB) [Streptococcus oralis subsp. tigurinus strain osk_001]
MKDLFLKRKQAFRKECVGYLRYVLNDHFVLFLLVLIGFLSYQYSQLLQDFPENHWPILLFLGIVSALLLAWGGIATYMEA
SDKLFLLVSEEEVKSHLKGQTTRSLVFWLFVQTLFLLLFAPLFLAMGYGLPIFLSYVLLLGAGKYLLFRQKASKFFTETG
LDWDYVISQESKRKQILLRFFALFTQVKGVSNSVKRRAYLDFILKTVQKVPGKIWQNLYLRSYLRNGDLFALSLRLLFLS
LLAVIFIEQAWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLEKGEKEKGLKQIVVGVGSAVLLLELLVGAVVFQG
KIALLALVGASLFLQLFYLPYQLKRLVDE
MKDLFLKRKQAFRKECVGYLRYVLNDHFVLFLLVLIGFLSYQYSQLLQDFPENHWPILLFLGIVSALLLAWGGIATYMEA
SDKLFLLVSEEEVKSHLKGQTTRSLVFWLFVQTLFLLLFAPLFLAMGYGLPIFLSYVLLLGAGKYLLFRQKASKFFTETG
LDWDYVISQESKRKQILLRFFALFTQVKGVSNSVKRRAYLDFILKTVQKVPGKIWQNLYLRSYLRNGDLFALSLRLLFLS
LLAVIFIEQAWIATAVVVLFNYLLLFQLLALYHAFDYQYLTQLFPLEKGEKEKGLKQIVVGVGSAVLLLELLVGAVVFQG
KIALLALVGASLFLQLFYLPYQLKRLVDE
Nucleotide
Download Length: 1050 bp
>NTDB_id=58100 STO1_RS07940 WP_096422735.1 1538465..1539514(-) (pptB) [Streptococcus oralis subsp. tigurinus strain osk_001]
ATGAAAGACTTGTTTTTAAAGCGAAAGCAGGCTTTTCGTAAGGAGTGTGTAGGTTATCTGCGTTATGTTCTCAATGACCA
CTTTGTCTTGTTCCTACTAGTTCTCATCGGTTTTCTATCTTACCAGTACAGTCAACTCTTGCAAGATTTTCCTGAAAATC
ACTGGCCCATCCTCTTGTTTTTGGGGATTGTATCTGCCTTGCTTTTGGCTTGGGGAGGGATTGCCACTTATATGGAGGCA
TCTGACAAGCTCTTTCTCTTAGTCAGTGAAGAAGAGGTCAAGTCCCACCTTAAAGGGCAGACGACGCGCTCACTGGTCTT
TTGGCTCTTTGTCCAAACCCTTTTCTTGCTTTTATTTGCGCCCTTATTTTTAGCCATGGGCTATGGCTTGCCTATCTTTC
TTTCCTACGTGCTTTTATTGGGAGCTGGGAAATATCTCCTCTTTCGCCAAAAAGCCAGTAAATTTTTTACAGAGACTGGG
CTTGACTGGGACTATGTGATCTCTCAAGAAAGCAAACGCAAGCAAATTTTGCTTCGTTTCTTTGCTCTCTTTACTCAGGT
CAAGGGCGTTTCAAATAGTGTCAAACGTCGCGCTTATCTAGATTTCATCCTAAAGACTGTTCAAAAGGTGCCTGGGAAGA
TTTGGCAAAATCTCTATCTCCGCTCTTATCTGCGAAATGGAGACCTCTTTGCCCTCAGTCTCCGCCTCCTCTTCCTATCC
TTGTTAGCTGTGATCTTTATTGAGCAAGCTTGGATCGCGACAGCAGTAGTAGTTTTATTTAACTATCTCCTGCTCTTTCA
GTTACTGGCCCTCTATCATGCCTTTGACTACCAGTACTTGACTCAGCTCTTTCCACTAGAAAAAGGGGAGAAAGAGAAGG
GATTGAAACAGATTGTAGTCGGTGTGGGAAGTGCAGTTCTTTTGTTAGAATTGCTGGTCGGAGCAGTGGTTTTTCAAGGG
AAAATAGCCTTGTTGGCTCTTGTAGGGGCTAGTCTCTTCCTACAATTGTTTTATTTACCTTACCAACTAAAAAGATTGGT
TGACGAATAG
ATGAAAGACTTGTTTTTAAAGCGAAAGCAGGCTTTTCGTAAGGAGTGTGTAGGTTATCTGCGTTATGTTCTCAATGACCA
CTTTGTCTTGTTCCTACTAGTTCTCATCGGTTTTCTATCTTACCAGTACAGTCAACTCTTGCAAGATTTTCCTGAAAATC
ACTGGCCCATCCTCTTGTTTTTGGGGATTGTATCTGCCTTGCTTTTGGCTTGGGGAGGGATTGCCACTTATATGGAGGCA
TCTGACAAGCTCTTTCTCTTAGTCAGTGAAGAAGAGGTCAAGTCCCACCTTAAAGGGCAGACGACGCGCTCACTGGTCTT
TTGGCTCTTTGTCCAAACCCTTTTCTTGCTTTTATTTGCGCCCTTATTTTTAGCCATGGGCTATGGCTTGCCTATCTTTC
TTTCCTACGTGCTTTTATTGGGAGCTGGGAAATATCTCCTCTTTCGCCAAAAAGCCAGTAAATTTTTTACAGAGACTGGG
CTTGACTGGGACTATGTGATCTCTCAAGAAAGCAAACGCAAGCAAATTTTGCTTCGTTTCTTTGCTCTCTTTACTCAGGT
CAAGGGCGTTTCAAATAGTGTCAAACGTCGCGCTTATCTAGATTTCATCCTAAAGACTGTTCAAAAGGTGCCTGGGAAGA
TTTGGCAAAATCTCTATCTCCGCTCTTATCTGCGAAATGGAGACCTCTTTGCCCTCAGTCTCCGCCTCCTCTTCCTATCC
TTGTTAGCTGTGATCTTTATTGAGCAAGCTTGGATCGCGACAGCAGTAGTAGTTTTATTTAACTATCTCCTGCTCTTTCA
GTTACTGGCCCTCTATCATGCCTTTGACTACCAGTACTTGACTCAGCTCTTTCCACTAGAAAAAGGGGAGAAAGAGAAGG
GATTGAAACAGATTGTAGTCGGTGTGGGAAGTGCAGTTCTTTTGTTAGAATTGCTGGTCGGAGCAGTGGTTTTTCAAGGG
AAAATAGCCTTGTTGGCTCTTGTAGGGGCTAGTCTCTTCCTACAATTGTTTTATTTACCTTACCAACTAAAAAGATTGGT
TGACGAATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pptB | Streptococcus salivarius strain HSISS4 |
47.429 |
100 |
0.476 |
| pptB | Streptococcus thermophilus LMD-9 |
46.286 |
100 |
0.464 |