Detailed information NTG0580908

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: I6L30_RS02205
• Genome accession: NZ_CP077365
• Coordinates: 472850..473665 (-)
• Length: 271 a.a.
• NCBI ID: WP_216985158.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain FDAARGOS 1400
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 467850..478665

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L30_RS02175 (I6L30_02175)	-	468159..468599 (-)	441	WP_216985157.1	SRPBCC family protein	-
I6L30_RS02180 (I6L30_02180)	tadA	468669..469172 (-)	504	WP_068934603.1	tRNA adenosine(34) deaminase TadA	-
I6L30_RS02185 (I6L30_02185)	-	469180..470304 (-)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
I6L30_RS02190 (I6L30_02190)	ung	470301..471014 (-)	714	WP_004701973.1	uracil-DNA glycosylase	-
I6L30_RS02195 (I6L30_02195)	-	471065..471661 (-)	597	WP_039251397.1	6-pyruvoyl trahydropterin synthase family protein	-
I6L30_RS02200 (I6L30_02200)	gspK	471891..472850 (-)	960	WP_174724229.1	type II secretion system minor pseudopilin GspK	-
I6L30_RS02205 (I6L30_02205)	xcpW	472850..473665 (-)	816	WP_216985158.1	type II secretion system minor pseudopilin GspJ	Machinery gene
I6L30_RS02210 (I6L30_02210)	xcpV	473665..474045 (-)	381	WP_004701982.1	type II secretion system minor pseudopilin GspI	Machinery gene
I6L30_RS02215 (I6L30_02215)	-	474035..474586 (-)	552	WP_004701984.1	type II secretion system protein	-
I6L30_RS02220 (I6L30_02220)	-	474596..475204 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
I6L30_RS02225 (I6L30_02225)	-	475242..476015 (-)	774	WP_077168509.1	TatD family hydrolase	-
I6L30_RS02230 (I6L30_02230)	-	476033..476374 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
I6L30_RS02235 (I6L30_02235)	-	476387..477367 (-)	981	WP_107973449.1	DNA polymerase III subunit delta'	-
I6L30_RS02240 (I6L30_02240)	kdsB	477379..478140 (-)	762	WP_216985159.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30536.78 Da
• Isoelectric Point: 9.3693

>NTDB_id=580908 I6L30_RS02205 WP_216985158.1 472850..473665(-) (xcpW) [Acinetobacter seifertii strain FDAARGOS 1400]
MIKNKYFCNRSKVSRLAAGSDVVTTDCSEHSSSSYAQTKRCFSDSHTRKTVSHLAARSSSARLARASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDADQKKIYRLKYTNLNTSNNEQPLSSTLLSQVDQYQVMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQVTVAGVSYEWIYSLNQSNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=580908 I6L30_RS02205 WP_216985158.1 472850..473665(-) (xcpW) [Acinetobacter seifertii strain FDAARGOS 1400]
ATGATAAAAAATAAGTACTTTTGCAATCGAAGCAAAGTTTCACGTCTTGCAGCTGGATCAGACGTTGTAACGACTGACTG
CTCAGAGCATAGCTCTTCGTCTTACGCTCAGACAAAGCGCTGTTTTAGTGATTCTCACACTCGAAAAACTGTTTCTCATC
TTGCGGCGCGATCGAGCAGTGCTCGATTAGCTCGCGCCTCAGGATTTACGTTGGTTGAGTTATTGGTTGCGATTGCTATT
TTCGCGGTTTTATCTTTATTGGGATGGAAAATATTCGATTATTTGCTTAAGGTCCGTGATCGTAACGCCGAACATGAAGT
GCATTTATTTGAATTACAAGATGCTTATCAACAAATTCTTCGTGATACTCTGCAAATTATTCCTTTATCTGCAAATCAAG
GTGGGCAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTACGTTTTAGCAAAGCAGGCGTAACTGATCCTTTAAAA
CAGGGGTTATCACCATTTGAACGAATTGAATATCGTTATGATGCTGACCAAAAAAAAATATATCGTCTTAAATATACAAA
TTTAAATACTTCGAATAACGAGCAACCTTTATCAAGTACCTTACTAAGTCAAGTTGACCAATATCAGGTTATGGTCTTAA
CTCCGCAAGAAGTAACAAAATGGCCCGAAGTTAATATTGATCCAACAAAACCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAAGTTACAGTTGCAGGAGTAAGTTATGAATGGATTTATAGCTTAAATCAAAGCAACTTAGCACTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	92.92	83.395	0.775