Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | I6L26_RS08725 | Genome accession | NZ_CP077303 |
| Coordinates | 1858922..1859302 (+) | Length | 126 a.a. |
| NCBI ID | WP_216978120.1 | Uniprot ID | - |
| Organism | Acinetobacter pittii strain FDAARGOS 1396 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1853922..1864302
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6L26_RS08695 (I6L26_08695) | kdsB | 1854828..1855589 (+) | 762 | WP_002121419.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| I6L26_RS08700 (I6L26_08700) | holB | 1855603..1856583 (+) | 981 | WP_002121362.1 | DNA polymerase III subunit delta' | - |
| I6L26_RS08705 (I6L26_08705) | pilZ | 1856594..1856935 (+) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| I6L26_RS08710 (I6L26_08710) | ycfH | 1856953..1857726 (+) | 774 | WP_002121462.1 | TatD family hydrolase | - |
| I6L26_RS08715 (I6L26_08715) | - | 1857763..1858371 (+) | 609 | WP_002121414.1 | TetR/AcrR family transcriptional regulator | - |
| I6L26_RS08720 (I6L26_08720) | - | 1858378..1858932 (+) | 555 | WP_002121405.1 | type II secretion system protein | - |
| I6L26_RS08725 (I6L26_08725) | xcpV | 1858922..1859302 (+) | 381 | WP_216978120.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| I6L26_RS08730 (I6L26_08730) | xcpW | 1859302..1860117 (+) | 816 | WP_002121460.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| I6L26_RS08735 (I6L26_08735) | gspK | 1860118..1861077 (+) | 960 | WP_002121457.1 | type II secretion system minor pseudopilin GspK | - |
| I6L26_RS08740 (I6L26_08740) | - | 1861305..1861901 (+) | 597 | WP_002121363.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| I6L26_RS08745 (I6L26_08745) | ung | 1861955..1862668 (+) | 714 | WP_002121342.1 | uracil-DNA glycosylase | - |
| I6L26_RS08750 (I6L26_08750) | hibch | 1862665..1863789 (+) | 1125 | WP_016803061.1 | enoyl-CoA hydratase/isomerase family protein | - |
| I6L26_RS08755 (I6L26_08755) | tadA | 1863795..1864298 (+) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13977.15 Da Isoelectric Point: 8.4453
>NTDB_id=580700 I6L26_RS08725 WP_216978120.1 1858922..1859302(+) (xcpV) [Acinetobacter pittii strain FDAARGOS 1396]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVEKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVEKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=580700 I6L26_RS08725 WP_216978120.1 1858922..1859302(+) (xcpV) [Acinetobacter pittii strain FDAARGOS 1396]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTGAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTGAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
92.857 |
100 |
0.929 |