Detailed information NTG0580701

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: I6L26_RS08730
• Genome accession: NZ_CP077303
• Coordinates: 1859302..1860117 (+)
• Length: 271 a.a.
• NCBI ID: WP_002121460.1
• Uniprot ID: A0A009NS11
• Organism: Acinetobacter pittii strain FDAARGOS 1396
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1854302..1865117

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6L26_RS08695 (I6L26_08695)	kdsB	1854828..1855589 (+)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
I6L26_RS08700 (I6L26_08700)	holB	1855603..1856583 (+)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
I6L26_RS08705 (I6L26_08705)	pilZ	1856594..1856935 (+)	342	WP_002121335.1	PilZ domain-containing protein	-
I6L26_RS08710 (I6L26_08710)	ycfH	1856953..1857726 (+)	774	WP_002121462.1	TatD family hydrolase	-
I6L26_RS08715 (I6L26_08715)	-	1857763..1858371 (+)	609	WP_002121414.1	TetR/AcrR family transcriptional regulator	-
I6L26_RS08720 (I6L26_08720)	-	1858378..1858932 (+)	555	WP_002121405.1	type II secretion system protein	-
I6L26_RS08725 (I6L26_08725)	xcpV	1858922..1859302 (+)	381	WP_216978120.1	type II secretion system minor pseudopilin GspI	Machinery gene
I6L26_RS08730 (I6L26_08730)	xcpW	1859302..1860117 (+)	816	WP_002121460.1	type II secretion system minor pseudopilin GspJ	Machinery gene
I6L26_RS08735 (I6L26_08735)	gspK	1860118..1861077 (+)	960	WP_002121457.1	type II secretion system minor pseudopilin GspK	-
I6L26_RS08740 (I6L26_08740)	-	1861305..1861901 (+)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
I6L26_RS08745 (I6L26_08745)	ung	1861955..1862668 (+)	714	WP_002121342.1	uracil-DNA glycosylase	-
I6L26_RS08750 (I6L26_08750)	hibch	1862665..1863789 (+)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
I6L26_RS08755 (I6L26_08755)	tadA	1863795..1864298 (+)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
I6L26_RS08760 (I6L26_08760)	-	1864369..1864809 (+)	441	WP_002121449.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30932.32 Da
• Isoelectric Point: 9.9694

>NTDB_id=580701 I6L26_RS08730 WP_002121460.1 1859302..1860117(+) (xcpW) [Acinetobacter pittii strain FDAARGOS 1396]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVNYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=580701 I6L26_RS08730 WP_002121460.1 1859302..1860117(+) (xcpW) [Acinetobacter pittii strain FDAARGOS 1396]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAATTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

3D structure

• AlphaFold DB: A0A009NS11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738