Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   MUA25_RS06130 Genome accession   NZ_CP094801
Coordinates   1258370..1259242 (+) Length   290 a.a.
NCBI ID   WP_000620184.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6155     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1253370..1264242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA25_RS06110 (MUA25_06105) sucC 1253486..1254652 (+) 1167 WP_045178815.1 ADP-forming succinate--CoA ligase subunit beta -
  MUA25_RS06115 (MUA25_06110) sucD 1254674..1255582 (+) 909 WP_000110252.1 succinate--CoA ligase subunit alpha -
  MUA25_RS06120 (MUA25_06115) - 1255809..1256927 (+) 1119 WP_250396345.1 LysM peptidoglycan-binding domain-containing protein -
  MUA25_RS06125 (MUA25_06120) fmhC 1256955..1258199 (+) 1245 WP_045178814.1 FemA/FemB family glycyltransferase FmhC -
  MUA25_RS06130 (MUA25_06125) dprA 1258370..1259242 (+) 873 WP_000620184.1 DNA-processing protein DprA Machinery gene
  MUA25_RS06135 (MUA25_06130) topA 1259416..1261491 (+) 2076 WP_001557331.1 type I DNA topoisomerase -
  MUA25_RS06140 (MUA25_06135) trmFO 1261647..1262954 (+) 1308 WP_045178813.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33547.97 Da        Isoelectric Point: 9.5241

>NTDB_id=580549 MUA25_RS06130 WP_000620184.1 1258370..1259242(+) (dprA) [Staphylococcus aureus strain IVB6155]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEGGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYRGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEIGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=580549 MUA25_RS06130 WP_000620184.1 1258370..1259242(+) (dprA) [Staphylococcus aureus strain IVB6155]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATACCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAGAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGCACATTAGC
ATTAAGAAATAAAATAGAAGAAATAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGTAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterProScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.276

100

0.983
  dprA Staphylococcus aureus N315

97.931

100

0.979