Detailed information NTG0580443

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: MUA38_RS03955
• Genome accession: NZ_CP094800
• Coordinates: 824457..825539 (+)
• Length: 360 a.a.
• NCBI ID: WP_025174683.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain IVB6158
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 819457..830539

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA38_RS03935 (MUA38_03930)	gdpS	819827..820897 (-)	1071	WP_000460983.1	GGDEF domain-containing protein GdpS	-
MUA38_RS03940 (MUA38_03935)	-	821215..822270 (+)	1056	WP_000258152.1	glycosyltransferase family 4 protein	-
MUA38_RS03945 (MUA38_03940)	-	822442..823083 (-)	642	WP_000192947.1	YigZ family protein	-
MUA38_RS03950 (MUA38_03945)	fakB1	823227..824093 (+)	867	WP_000686342.1	fatty acid kinase binding subunit FakB1	-
MUA38_RS03955 (MUA38_03950)	comFA	824457..825539 (+)	1083	WP_025174683.1	DEAD/DEAH box helicase	Machinery gene
MUA38_RS03960 (MUA38_03955)	-	825532..826206 (+)	675	WP_001057971.1	ComF family protein	-
MUA38_RS03965 (MUA38_03960)	hpf	826267..826836 (+)	570	WP_108919260.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
MUA38_RS03970 (MUA38_03965)	secA	827253..829784 (+)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
MUA38_RS03975 (MUA38_03970)	-	829826..829924 (+)	99	Protein_775	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 41996.54 Da
• Isoelectric Point: 9.7563

>NTDB_id=580443 MUA38_RS03955 WP_025174683.1 824457..825539(+) (comFA) [Staphylococcus aureus strain IVB6158]
MDNVTRYKITESSQSASQAYYHLSFELSEQQSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINKQRYTLVFFNNIEAM
IKTFSVYKHKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQKMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=580443 MUA38_RS03955 WP_025174683.1 824457..825539(+) (comFA) [Staphylococcus aureus strain IVB6158]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTGCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCAGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGACGACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGTCAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACGATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGCTATTTCAAACTTAATAATAATAAGATTCAGA
AAATGTTATATCGAATTTTACAAGATCAAATTAATAAACAACGTTATACACTGGTGTTTTTTAACAATATAGAAGCAATG
ATTAAAACATTTTCGGTTTATAAGCATAAAATTACTAAATTAACATATGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACAACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGTCGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGAGTAAGTATGAATATGATTCAAGCAAAAAAAGAGATTCAAAA
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (25-173)

• Helicase conserved C-terminal domain (Helicase_C) (214-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367
comFA/cflA	Streptococcus mitis SK321	37.356	96.667	0.361