Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   I6L27_RS18260 Genome accession   NZ_CP077232
Coordinates   3849222..3853706 (+) Length   1494 a.a.
NCBI ID   WP_216967803.1    Uniprot ID   -
Organism   Acinetobacter pittii strain FDAARGOS 1397     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 3844222..3858706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6L27_RS18235 (I6L27_18240) - 3844664..3845302 (-) 639 WP_062850073.1 hypothetical protein -
  I6L27_RS18240 (I6L27_18245) pilG 3845587..3845970 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  I6L27_RS18245 (I6L27_18250) pilH 3845994..3846356 (+) 363 WP_002116220.1 response regulator -
  I6L27_RS18250 (I6L27_18255) pilI 3846417..3846953 (+) 537 WP_087087309.1 chemotaxis protein CheW -
  I6L27_RS18255 (I6L27_18260) pilJ 3846996..3849074 (+) 2079 WP_061874138.1 methyl-accepting chemotaxis protein -
  I6L27_RS18260 (I6L27_18265) chpA 3849222..3853706 (+) 4485 WP_216967803.1 Hpt domain-containing protein Regulator
  I6L27_RS18265 (I6L27_18270) - 3853706..3854173 (+) 468 WP_031949217.1 hypothetical protein -
  I6L27_RS18270 (I6L27_18275) - 3854376..3855767 (+) 1392 WP_216967804.1 coproporphyrinogen-III oxidase family protein -
  I6L27_RS18275 (I6L27_18280) - 3855776..3856657 (+) 882 WP_016143399.1 alpha/beta fold hydrolase -
  I6L27_RS18280 (I6L27_18285) dapE 3856796..3857932 (-) 1137 WP_016143398.1 succinyl-diaminopimelate desuccinylase -
  I6L27_RS18285 (I6L27_18290) - 3858058..3858201 (-) 144 WP_014207555.1 entericidin A/B family lipoprotein -

Sequence


Protein


Download         Length: 1494 a.a.        Molecular weight: 170538.04 Da        Isoelectric Point: 4.4776

>NTDB_id=580103 I6L27_RS18260 WP_216967803.1 3849222..3853706(+) (chpA) [Acinetobacter pittii strain FDAARGOS 1397]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFVEEIEEIFVELQSLIDEWMQSKSIATLIEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLGLTPNIQQYVQLVFKFYFFKLVDDFKSKKDHTLDFRPLILLGQQLQQQKSLEPALDELLLLS
DILTAETQTGLETHDLEPETAKVLTISTPEVAIENEQTLAETLILFMEEAEEHLATIDQFLAQEIHQHESYNALIRALHT
LRGSSAMAHVEPIFDASTKVEHLFKILLQEELSSHSEEISLLRYYREFIRNSLDLLAAHCSTEQLESDLQKFNQIWDAYM
EQHGEHSSPLMPPHGLVSQLLQLDVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMVGLYEYTNQLKESY
DILLERPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLEELKLYTQHIPILNIEPTFNTEVEQTTNEPL
IENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEADELLEGMDTDLNIWVKDQENFAALNNLMRYLHTLKGG
ANMIQATYIGLIAHELESIYERLIQKQLIASSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKNAAQTYDSFSS
TVKDEQTQTEAYVIPELNFEALQQEVINNTALSFSELTSGSEQIAESNNQLVEYAELRVLYADHDHTESVQDQDINSVVE
QTFMEEAAELLEMADHLLRQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFSSNIYDNL
LESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTNLFSTEPVMSFVQGDGTEPPPMIGAWEHTERLDQ
NNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIENSRYTEFD
PLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQRIVRQTST
ALNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAQKPETGRIELNIHRQGTDVVVTFKDDGQGI
DIEKVRQKALMSGLIHSEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQGTVFTIR
VPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSAQEVFEFENKRYPLRYLSEFICNQPIPRLSGMMYSL
PVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTRRHKPLNETIY
RQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNLVRHHDLH
QDMPVIMITSRTGEKHRERAFALGVNQYMGKPFQEEDLLHNIDALFMTFEGGLA

Nucleotide


Download         Length: 4485 bp        

>NTDB_id=580103 I6L27_RS18260 WP_216967803.1 3849222..3853706(+) (chpA) [Acinetobacter pittii strain FDAARGOS 1397]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTATTCTCAACAAGATGATGAATTTCT
TGAAATCTTTGTCGAAGAAATTGAGGAAATTTTTGTTGAATTACAATCTTTGATTGACGAGTGGATGCAATCTAAAAGTA
TTGCTACGCTTATCGAAATCCGCCGTCATTTTCATACATTGAAAGGTTCTGGCCGGATGATTGGTGCCAAATCTTCTGCT
GAGCTTGCTTGGACTGTAGAAGATACGCTGAATCGCGTAATCAATCAGAGTCTCGGATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTAGATGACTTCAAATCTAAAAAAGATCATACCCTAGACTTTA
GGCCCCTCATTTTATTGGGGCAACAATTACAACAACAGAAAAGTTTAGAACCCGCTTTAGACGAACTTTTATTATTATCA
GATATCCTTACTGCTGAAACTCAAACTGGTTTAGAAACACATGATTTAGAACCAGAAACAGCTAAAGTTTTAACTATATC
TACTCCAGAAGTCGCTATAGAAAATGAGCAGACCCTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAACACT
TAGCGACGATTGATCAATTTTTAGCACAAGAAATACATCAGCATGAAAGTTATAATGCTTTAATACGTGCGTTACATACG
TTACGCGGCAGCTCGGCCATGGCGCATGTTGAACCAATCTTTGATGCTAGTACCAAGGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCACTCTGAAGAAATTTCATTACTCCGTTATTATCGTGAGTTTATTCGAAATAGTTTAG
ATCTATTGGCTGCACATTGCTCTACTGAGCAATTGGAATCTGATCTACAAAAATTTAATCAGATTTGGGATGCTTATATG
GAGCAGCATGGTGAGCATTCAAGCCCACTCATGCCTCCACATGGATTAGTGTCTCAGTTATTACAATTAGATGTTGCTGA
ATTACTTGATGCGGAATTAGATTTTGAGAAGGGAATACGGACAGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTGTTGTTGCAACATACTCAGTCGCAAGCAATGGTTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAT
GACATATTACTTGAACGACCTGATTTATTACAATCAGACTATGTTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAATTATTTGATGCCTTAGCTGCGGGACAAAGAGTAAGTATTATTGAGCAACACCAAAATGTCTTGGAAGAGCTAAAAC
TATATACTCAACATATTCCAATTCTTAATATTGAACCAACCTTTAATACTGAAGTTGAACAAACAACGAATGAACCTCTG
ATAGAAAATGTATTCACTGATCAGGTTACAATAGGGCAGAGTGTACAACTAGATCGACAGTTTATTTCATCTGAGCATGT
AAATCGTCATTTTGATCCAGATCTATTAGATATTTTTCTTGAAGAAGCTGATGAGTTGCTTGAAGGGATGGATACAGATC
TTAATATTTGGGTTAAAGATCAAGAAAATTTTGCCGCTCTTAATAATCTGATGCGTTATTTGCATACCTTAAAAGGTGGG
GCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAATTAGAAAGTATTTATGAGCGATTAATTCAAAAACA
GTTAATAGCCTCGTCTGCTCTCATTGATTTTATTCGACTAGTTCAAGATGACTTGGCTGACCGTCTTCAAATAGTACGTG
AACAGCATCTAGATTATGCTGCTTCTCATACTATTCAAGCGCTTAAAAATGCAGCCCAGACCTATGATTCATTTAGTTCT
ACTGTTAAAGACGAGCAAACACAAACTGAAGCATATGTTATACCTGAATTAAATTTTGAAGCATTACAGCAAGAAGTAAT
AAATAATACGGCATTAAGCTTCAGTGAGTTAACTTCTGGTTCTGAGCAGATTGCCGAGTCTAATAATCAACTTGTTGAAT
ACGCTGAATTACGAGTTCTTTATGCTGATCACGATCATACAGAGAGTGTCCAAGATCAAGATATTAACTCTGTTGTCGAG
CAGACATTTATGGAGGAAGCGGCCGAACTATTAGAGATGGCCGATCACTTATTAAGACAATGGTTCGAGCAGCGTACAAA
CCGTAGTATCTTGCTTCAGCTGCAAAGGGCTGTGCACAGCTTGAAAGGTGGTTCCCGTATGTTGGGACTTGAAACCGTAC
AAGCGATTGCTTATCAGCTCGAAAACGCTTTTGAACAGTTTGCGCTTCATCATTTCAGCTCAAATATCTATGACAACTTA
TTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCAATTTTTAAACAAAATTATCAACACTTCGATGGTTTACAACAAAGTCT
GGAAAATATTCAGTTCATTGAAACGGCAATTCAAATTCCTAGTAAATTAACTAGAACTAATCTATTTAGCACGGAACCTG
TAATGAGTTTTGTGCAAGGTGACGGTACAGAACCGCCGCCAATGATAGGCGCATGGGAACACACAGAACGGCTTGATCAA
AATAATGAGATGATTCGAGTTTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGGTGAAAACTCGATTAACCGTTC
GCGAATTGAAATGGATTTAAGCCAATTTGGTCATACCTTAGCGGAAATGGAATTGGCTATTCAGCGACTTGCAGATCAGT
TGCGTCGAATGGAAGGCGAATTGGAAACCCAAATTATTGCAAAACACGGTATTGAGAACTCGCGTTATACAGAATTTGAT
CCGTTAGAGATGGACCAATATTCTTCGTTAAATCAGTTATCAAAGTCTCTTGCAGAGTCTGCATCGGATTTAGTAGATTT
TAAAAATACATTATCTGAAAAGATCAGAGACACCGAAGGTTTATTGGTACAACAATCGCGTATTCAGGCTGAAATTCAAG
AAGGTCTTATGCGAACACGTTTAGTACCATTCTCTCGATTGCTACCTCGTTTACAAAGAATTGTAAGGCAGACTTCTACC
GCGTTAAATCGACCAGCAGAGCTTTTTGTTAATAATACAGAGGGCGAGCTGGACCGGACAATGCTAGAGCGTTTGGTTAC
GCCACTTGAGCACATGCTTAGAAATGCAATTGACCATGGACTAGAAGACCGTGCACAACGTGAGCAAGCGCAGAAACCAG
AAACTGGACGTATTGAACTGAATATTCATCGTCAAGGTACAGATGTTGTCGTTACCTTTAAAGACGATGGACAAGGTATT
GATATCGAGAAGGTTCGTCAAAAAGCATTAATGTCTGGTTTGATTCACTCTGAACAAGTATTAGAACATCAAGATATTTT
ACAACTGATTTTCCATCCTGGTTTAAGCACTGCCGATCAAGTCACTCAGATTTCAGGTCGTGGTGTAGGACTGGATGTAG
TGCAGAGTGATATTAAGGCCTTAGGTGGCCACGTAAGTGTCGACTCTGTCTATGGGCAGGGCACTGTCTTTACCATACGT
GTTCCAACGACTGTAGCCGTTAGTGATGCCTTAATGGTTAAAGTTGCTGATCAGCAATTTGCAATCCCATTGGCTCAAAT
TGATCGAATTGTGCGGGTTTCACCAGCCTCATTAGAGCAATATTTCGGAAGTGCACAAGAAGTCTTTGAATTTGAAAATA
AGCGCTATCCATTACGTTATTTATCTGAGTTTATTTGTAATCAACCAATTCCGCGCTTAAGTGGAATGATGTATTCATTA
CCAGTATTAATGATTAAAGCAAATAATGGACAAACCGTCGCATTATTAGTTGACCAACTGATTGGCTCACGTGCACAGAT
TGTAGTTAAACCAATTGGACAGCAGTTCTCTAGCATTGGCGCGATTGCAGGAGCAACTATTTTAGGTGATGGTCAAGTTT
GCTTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAGTCTACTCGTCGACATAAGCCGCTTAATGAAACTATCTAT
AGACAACGCGAGTCTGATGAACGACGTCTTATCATGATTGTAGATGACTCGGTAACTGTACGTAAGGTGACGTCTCGCTT
ACTTGAACGTCAGGGCTATGATGTAGTCACAGCTAAAGATGGGGTCGATGCAATTGAACAGTTGGAAAATATTAAACCAG
ATCTCATGTTACTTGATATTGAAATGCCGCGAATGGATGGCTTTGAGGTGCTTAACCTCGTTCGACATCATGATCTACAC
CAAGATATGCCAGTGATTATGATTACATCACGAACTGGTGAAAAACACCGTGAACGAGCATTTGCTTTAGGTGTTAACCA
GTACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCCTTATTCATGACATTTGAAGGGGGACTTG
CCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

79.681

100

0.803