Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   MUA79_RS06830 Genome accession   NZ_CP094785
Coordinates   1361811..1362683 (+) Length   290 a.a.
NCBI ID   WP_000620184.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6169     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1356811..1367683
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA79_RS06810 (MUA79_06795) sucC 1356926..1358092 (+) 1167 WP_045178815.1 ADP-forming succinate--CoA ligase subunit beta -
  MUA79_RS06815 (MUA79_06800) sucD 1358114..1359022 (+) 909 WP_000110252.1 succinate--CoA ligase subunit alpha -
  MUA79_RS06820 (MUA79_06805) - 1359249..1360367 (+) 1119 WP_262543911.1 LysM peptidoglycan-binding domain-containing protein -
  MUA79_RS06825 (MUA79_06810) fmhC 1360395..1361639 (+) 1245 WP_045178814.1 FemA/FemB family glycyltransferase FmhC -
  MUA79_RS06830 (MUA79_06815) dprA 1361811..1362683 (+) 873 WP_000620184.1 DNA-processing protein DprA Machinery gene
  MUA79_RS06835 (MUA79_06820) topA 1362858..1364933 (+) 2076 WP_001557331.1 type I DNA topoisomerase -
  MUA79_RS06840 (MUA79_06825) trmFO 1365089..1366396 (+) 1308 WP_045178813.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33547.97 Da        Isoelectric Point: 9.5241

>NTDB_id=579754 MUA79_RS06830 WP_000620184.1 1361811..1362683(+) (dprA) [Staphylococcus aureus strain IVB6169]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEGGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYRGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEIGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=579754 MUA79_RS06830 WP_000620184.1 1361811..1362683(+) (dprA) [Staphylococcus aureus strain IVB6169]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATACCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAGAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGCACATTAGC
ATTAAGAAATAAAATAGAAGAAATAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGTAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterProScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.276

100

0.983
  dprA Staphylococcus aureus N315

97.931

100

0.979