Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | SPN994039_RS09875 | Genome accession | NC_021005 |
| Coordinates | 1822663..1822965 (-) | Length | 100 a.a. |
| NCBI ID | WP_000413382.1 | Uniprot ID | - |
| Organism | Streptococcus pneumoniae SPN994039 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1817663..1827965
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPN994039_RS09840 (SPN994039_17930) | rnpA | 1818342..1818713 (-) | 372 | WP_000739244.1 | ribonuclease P protein component | - |
| SPN994039_RS13275 | - | 1818730..1818861 (-) | 132 | WP_000768904.1 | hypothetical protein | - |
| SPN994039_RS09845 (SPN994039_17940) | - | 1818862..1820052 (-) | 1191 | WP_000167765.1 | acetate kinase | - |
| SPN994039_RS09850 (SPN994039_17950) | comYH | 1820103..1821056 (-) | 954 | WP_000345099.1 | class I SAM-dependent methyltransferase | Machinery gene |
| SPN994039_RS11925 (SPN994039_17960) | - | 1821117..1821711 (-) | 595 | Protein_1868 | methyltransferase domain-containing protein | - |
| SPN994039_RS09865 (SPN994039_17970) | comGG/cglG | 1821848..1822261 (-) | 414 | WP_000265624.1 | competence type IV pilus minor pilin ComGG | Machinery gene |
| SPN994039_RS09870 (SPN994039_17980) | comGF/cglF | 1822239..1822700 (-) | 462 | WP_000250542.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SPN994039_RS09875 (SPN994039_17990) | comGE/cglE | 1822663..1822965 (-) | 303 | WP_000413382.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| SPN994039_RS09880 (SPN994039_18000) | comGD/cglD | 1822928..1823332 (-) | 405 | WP_000588013.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SPN994039_RS09885 (SPN994039_18010) | comGC/cglC | 1823325..1823651 (-) | 327 | WP_000738636.1 | comG operon protein ComGC | Machinery gene |
| SPN994039_RS09890 (SPN994039_18020) | comGB/cglB | 1823653..1824669 (-) | 1017 | WP_074017570.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SPN994039_RS09895 (SPN994039_18030) | comGA/cglA/cilD | 1824617..1825558 (-) | 942 | WP_000249552.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SPN994039_RS09900 (SPN994039_18040) | - | 1825634..1825999 (-) | 366 | WP_000286415.1 | DUF1033 family protein | - |
| SPN994039_RS09905 (SPN994039_18050) | - | 1826150..1827208 (-) | 1059 | WP_000649468.1 | zinc-dependent alcohol dehydrogenase family protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 11108.08 Da Isoelectric Point: 9.7273
>NTDB_id=57971 SPN994039_RS09875 WP_000413382.1 1822663..1822965(-) (comGE/cglE) [Streptococcus pneumoniae SPN994039]
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
MEKLNALRKQKIRAVILLEAVVALAIFASIATLLLGQIQKNRQEEAKILQKEEVLRVAKMALQTGQNQVSINGVEIQVFS
SEKGLEVYHGSEQLLAIKEP
Nucleotide
Download Length: 303 bp
>NTDB_id=57971 SPN994039_RS09875 WP_000413382.1 1822663..1822965(-) (comGE/cglE) [Streptococcus pneumoniae SPN994039]
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCCTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
ATGGAAAAATTAAACGCATTAAGGAAACAAAAAATTAGGGCAGTGATTTTACTGGAAGCAGTAGTCGCTCTAGCTATCTT
TGCCAGCATTGCGACCCTCCTTTTGGGACAAATTCAAAAAAATAGGCAAGAGGAAGCAAAAATCTTGCAAAAGGAAGAAG
TCTTGAGGGTAGCTAAGATGGCCCTGCAGACGGGGCAAAATCAGGTAAGCATCAACGGAGTTGAGATTCAGGTATTTTCT
AGTGAAAAAGGATTGGAGGTCTACCATGGTTCAGAACAGTTGTTGGCAATCAAAGAGCCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comGE/cglE | Streptococcus mitis NCTC 12261 |
98 |
100 |
0.98 |
| comGE/cglE | Streptococcus mitis SK321 |
98 |
100 |
0.98 |
| comYE | Streptococcus mutans UA140 |
44.444 |
90 |
0.4 |
| comYE | Streptococcus mutans UA159 |
44.444 |
90 |
0.4 |