Detailed information    

insolico Bioinformatically predicted

Overview

Name   recR   Type   Machinery gene
Locus tag   MUA59_RS02345 Genome accession   NZ_CP094782
Coordinates   497041..497637 (+) Length   198 a.a.
NCBI ID   WP_000559156.1    Uniprot ID   Q8NY07
Organism   Staphylococcus aureus strain IVB6172     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 492041..502637
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA59_RS02315 (MUA59_02300) treR 492968..493696 (+) 729 WP_000240628.1 trehalose operon repressor -
  MUA59_RS02325 (MUA59_02310) - 494097..494198 (+) 102 WP_014936987.1 hypothetical protein -
  MUA59_RS02330 (MUA59_02315) - 494337..494861 (+) 525 WP_001167833.1 GNAT family N-acetyltransferase -
  MUA59_RS02335 (MUA59_02320) dnaX 494930..496627 (+) 1698 WP_262607881.1 DNA polymerase III subunit gamma/tau -
  MUA59_RS02340 (MUA59_02325) - 496717..497034 (+) 318 WP_001213992.1 YbaB/EbfC family nucleoid-associated protein -
  MUA59_RS02345 (MUA59_02330) recR 497041..497637 (+) 597 WP_000559156.1 recombination mediator RecR Machinery gene
  MUA59_RS02350 (MUA59_02335) - 497845..497941 (+) 97 Protein_464 hypothetical protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22099.51 Da        Isoelectric Point: 4.7564

>NTDB_id=579635 MUA59_RS02345 WP_000559156.1 497041..497637(+) (recR) [Staphylococcus aureus strain IVB6172]
MHYPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDVKRELTYCSVCGHITENDPCYICEDKQRDRS
VICVVEDDKDVIAMEKMREYKGLYHVLHGSISPMDGIGPEDINIPSLIERLKNDEVSELILAMNPNLEGESTAMYISRLV
KPIGIKVTRLAQGLSVGGDLEYADEVTLSKAIAGRTEM

Nucleotide


Download         Length: 597 bp        

>NTDB_id=579635 MUA59_RS02345 WP_000559156.1 497041..497637(+) (recR) [Staphylococcus aureus strain IVB6172]
ATGCATTATCCAGAACCTATATCAAAGCTTATTGATAGCTTTATGAAATTGCCAGGCATTGGTCCAAAGACAGCCCAACG
TCTGGCTTTTCATACCTTAGATATGAAAGAAGACGATGTTGTTCAGTTTGCCAAAGCATTAGTAGATGTTAAAAGAGAAT
TAACATATTGTAGCGTATGTGGTCACATTACTGAAAATGATCCATGTTATATTTGTGAAGATAAGCAAAGAGATCGTTCA
GTTATTTGTGTTGTGGAAGATGACAAAGATGTCATAGCTATGGAAAAAATGAGAGAATACAAAGGTTTATATCACGTTTT
ACATGGGTCTATTTCGCCTATGGATGGAATTGGACCAGAAGATATTAATATTCCTTCATTGATTGAACGCTTGAAAAACG
ATGAAGTTAGCGAATTAATCTTAGCTATGAACCCGAACTTAGAGGGGGAATCTACTGCCATGTATATTTCTAGATTAGTT
AAGCCTATAGGTATCAAAGTGACGAGATTAGCACAAGGGTTATCTGTAGGTGGCGATTTAGAGTATGCTGACGAAGTAAC
ATTATCTAAAGCAATCGCAGGTAGAACAGAAATGTAA

Domains

Predicted by InterProScan.

Toprim domain (Toprim_4)

(80-171)

RecR protein (RecR_ZnF)

(40-78)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q8NY07

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recR Bacillus subtilis subsp. subtilis str. 168

77.273

100

0.773
  recR Streptococcus pneumoniae R6

64.141

100

0.641
  recR Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539

48.205

98.485

0.475