Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   SPYKS030_RS02150 Genome accession   NZ_AP018337
Coordinates   406535..407569 (+) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain KS030     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 401535..412569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYKS030_RS02120 (SPYKS030_03630) tsaE 402600..403061 (+) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SPYKS030_RS02125 (SPYKS030_03640) - 403036..403560 (+) 525 WP_002983369.1 GNAT family N-acetyltransferase -
  SPYKS030_RS02130 (SPYKS030_03650) brpA 403569..404852 (+) 1284 WP_002994335.1 biofilm formation/cell division transcriptional regulator BrpA -
  SPYKS030_RS02135 (SPYKS030_03660) - 404963..405319 (-) 357 WP_002988657.1 hypothetical protein -
  SPYKS030_RS02140 (SPYKS030_03670) - 405316..405735 (-) 420 WP_002983376.1 HIT family protein -
  SPYKS030_RS02145 (SPYKS030_03680) pptA 405807..406532 (+) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  SPYKS030_RS02150 (SPYKS030_03690) pptB 406535..407569 (+) 1035 WP_010922583.1 ABC transporter permease Regulator
  SPYKS030_RS02155 (SPYKS030_03700) ccrZ 407633..408424 (+) 792 WP_002983385.1 cell cycle regulator CcrZ -
  SPYKS030_RS02160 (SPYKS030_03710) trmB 408424..409059 (+) 636 WP_120164360.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SPYKS030_RS02170 (SPYKS030_03720) rimP 409318..409854 (+) 537 WP_011054929.1 ribosome maturation factor RimP -
  SPYKS030_RS02175 (SPYKS030_03730) nusA 410029..411186 (+) 1158 WP_002994325.1 transcription termination factor NusA -
  SPYKS030_RS02180 (SPYKS030_03740) rnpM 411202..411498 (+) 297 WP_002983486.1 RNase P modulator RnpM -
  SPYKS030_RS02185 (SPYKS030_03750) - 411491..411793 (+) 303 WP_002983488.1 YlxQ-related RNA-binding protein -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=57949 SPYKS030_RS02150 WP_010922583.1 406535..407569(+) (pptB) [Streptococcus pyogenes strain KS030]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=57949 SPYKS030_RS02150 WP_010922583.1 406535..407569(+) (pptB) [Streptococcus pyogenes strain KS030]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427