Detailed information NTG0579295

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: MUA47_RS04035
• Genome accession: NZ_CP094773
• Coordinates: 838699..839781 (+)
• Length: 360 a.a.
• NCBI ID: WP_025174683.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain IVB6195
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 833699..844781

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MUA47_RS04015 (MUA47_04015)	gdpS	834069..835139 (-)	1071	WP_000460983.1	GGDEF domain-containing protein GdpS	-
MUA47_RS04020 (MUA47_04020)	-	835457..836512 (+)	1056	WP_000258152.1	glycosyltransferase family 4 protein	-
MUA47_RS04025 (MUA47_04025)	-	836684..837325 (-)	642	WP_000192947.1	YigZ family protein	-
MUA47_RS04030 (MUA47_04030)	fakB1	837469..838335 (+)	867	WP_000686342.1	fatty acid kinase binding subunit FakB1	-
MUA47_RS04035 (MUA47_04035)	comFA	838699..839781 (+)	1083	WP_025174683.1	DEAD/DEAH box helicase	Machinery gene
MUA47_RS04040 (MUA47_04040)	-	839774..840448 (+)	675	WP_001057971.1	ComF family protein	-
MUA47_RS04045 (MUA47_04045)	hpf	840509..841081 (+)	573	WP_000617735.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
MUA47_RS04050 (MUA47_04050)	secA	841495..844026 (+)	2532	WP_000506531.1	preprotein translocase subunit SecA	-
MUA47_RS04055 (MUA47_04055)	-	844068..844166 (+)	99	Protein_791	hypothetical protein	-

Sequence

Protein

• Length: 360 a.a.
• Molecular weight: 41996.54 Da
• Isoelectric Point: 9.7563

>NTDB_id=579295 MUA47_RS04035 WP_025174683.1 838699..839781(+) (comFA) [Staphylococcus aureus strain IVB6195]
MDNVTRYKITESSQSASQAYYHLSFELSEQQSYASEHIVRAIRMRQTILLYAVTGAGKTEMMFQGIQYARRQGDNIAIVS
PRVDVVVEISKRIKDAFLNEDIDILHQQSSQQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNNKIQKMLYRILQDQINKQRYTLVFFNNIEAM
IKTFSVYKHKITKLTYVHSEDVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALIQIAGRVGRKL
ECPTGKVLFFHEGVSMNMIQAKKEIQKMNKLALKRGWIDE

Nucleotide

• Length: 1083 bp

>NTDB_id=579295 MUA47_RS04035 WP_025174683.1 838699..839781(+) (comFA) [Staphylococcus aureus strain IVB6195]
ATGGATAATGTAACAAGATATAAAATAACAGAGAGTTCGCAAAGTGCATCACAAGCATATTATCATCTCTCATTTGAATT
GTCGGAACAGCAGTCTTATGCCTCAGAACATATTGTTCGAGCCATTAGAATGAGACAAACGATTTTGTTATATGCAGTAA
CAGGTGCAGGTAAGACAGAAATGATGTTTCAAGGCATTCAATATGCAAGACGACAGGGAGATAATATAGCTATTGTGTCA
CCACGTGTAGATGTTGTTGTAGAAATTAGTAAACGTATTAAAGACGCATTTCTTAATGAAGATATAGACATACTACACCA
GCAATCAAGTCAACAATTTGAAGGGCATTTTGTTGTATGCACAGTGCATCAACTTTACCGATTCAAACAGCACTTTGATA
CTATTTTTATTGATGAAGTCGATGCCTTTCCTTTATCAATGGATAAAAGTTTACAACAAGCATTGAAGTCATCTTCTAAA
GTTGAACATGCAACGATTTATATGACAGCAACACCACCGAAACAACTTCTGTCAGAGATTCCCCACGAAAATATAATTAA
ATTGCCAGCTCGCTTTCATAAAAAATCACTTCCAGTTCCTAAATATCGCTATTTCAAACTTAATAATAATAAGATTCAGA
AAATGTTATATCGAATTTTACAAGATCAAATTAATAAACAACGTTATACACTGGTGTTTTTTAACAATATAGAAGCAATG
ATTAAAACATTTTCGGTTTATAAGCATAAAATTACTAAATTAACATATGTCCATAGCGAGGATGTTTTTCGCTTTGAAAA
AGTTGAACAATTAAGGAATGGACATTTCGATGTCATTTTTACTACAACAATATTAGAACGTGGATTTACAATGGCAAATT
TGGATGTTGTTGTTATCGATGCACATCAATATACTCAAGAGGCTTTAATACAAATTGCTGGACGTGTTGGTCGAAAATTA
GAATGTCCTACTGGAAAAGTATTGTTTTTTCATGAAGGAGTAAGTATGAATATGATTCAAGCAAAAAAAGAGATTCAAAA
GATGAACAAATTAGCATTAAAAAGAGGTTGGATTGATGAATAA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (25-173)

• Helicase conserved C-terminal domain (Helicase_C) (214-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	38.938	94.167	0.367
comFA/cflA	Streptococcus mitis SK321	37.356	96.667	0.361