Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   KSF55_RS09365 Genome accession   NZ_CP077099
Coordinates   2094384..2095661 (-) Length   425 a.a.
NCBI ID   WP_252268356.1    Uniprot ID   -
Organism   Lactiplantibacillus pentosus strain 9D3     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2089384..2100661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KSF55_RS09360 (KSF55_09325) - 2092636..2094345 (-) 1710 WP_003638962.1 proline--tRNA ligase -
  KSF55_RS09365 (KSF55_09330) eeP 2094384..2095661 (-) 1278 WP_252268356.1 RIP metalloprotease RseP Regulator
  KSF55_RS09370 (KSF55_09335) - 2095698..2096483 (-) 786 WP_050338486.1 phosphatidate cytidylyltransferase -
  KSF55_RS09375 (KSF55_09340) - 2096499..2097278 (-) 780 WP_050338485.1 isoprenyl transferase -
  KSF55_RS09380 (KSF55_09345) frr 2097398..2097961 (-) 564 WP_003638966.1 ribosome recycling factor -
  KSF55_RS09385 (KSF55_09350) pyrH 2097963..2098685 (-) 723 WP_003638967.1 UMP kinase -
  KSF55_RS09390 (KSF55_09355) tsf 2098885..2099763 (-) 879 WP_003638968.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 46258.91 Da        Isoelectric Point: 10.0234

>NTDB_id=579293 KSF55_RS09365 WP_252268356.1 2094384..2095661(-) (eeP) [Lactiplantibacillus pentosus strain 9D3]
MIVTIITFIIVFGILVIVHEFGHFYFAKKAGILVREFSVGMGPKAVAFRRNATTYTLRFLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGQDGIVHSINASKKTTLFNGIPLSVTATDLERELWIEGYENGDESEVKRYSVDHDATIIESDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTSTTTNVAATTANSVARQAGIQKGDQIVAVNGKKMTSAQ
SISLLIQDSPKQRLRLTIKRDGQTKKITVTPVAKTVSGNRIGQIGVMWATKTDKSFGAKLAYGFTGSWNITKQIFQVLGR
MVTHGFSLNDLGGPVAIFATTSQAAKSGLRTVIYLLAVLSINLGIVNLLPIPALDGGKLLLNIVEGIRGKPLRVETESVI
TLIGFGLLMLLMILVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=579293 KSF55_RS09365 WP_252268356.1 2094384..2095661(-) (eeP) [Lactiplantibacillus pentosus strain 9D3]
TTGATCGTTACAATTATTACGTTCATTATCGTTTTCGGAATCTTGGTTATCGTCCATGAATTTGGGCACTTCTATTTTGC
CAAAAAGGCTGGGATTTTGGTGCGTGAATTTTCTGTTGGGATGGGACCCAAGGCAGTTGCGTTTCGGCGGAATGCGACGA
CTTATACGTTACGTTTCTTGCCAATTGGTGGGTACGTGCGGATGGCCGGAGTCGCTGACGATGAGGATGAGGAACTGAAA
CCCGGAACGCCAGTCAGCTTACAGATCGGTCAGGATGGCATCGTCCATTCAATCAATGCTAGTAAGAAGACGACGTTGTT
CAACGGGATTCCGCTATCTGTCACGGCGACCGACTTAGAGCGCGAGCTATGGATCGAAGGCTATGAGAATGGCGATGAGA
GCGAAGTTAAACGTTATTCAGTCGACCACGATGCGACCATTATCGAAAGTGATGGGACTGAGGTGCAGATTGCCCCAGTA
GATGTTCAATTTCAGTCAGCCAAGCTTTGGCAGCGGATGCTGACCAATTTTGCTGGTCCCATGAATAACTTCATCTTAGC
CATCATCACGTTTGCAATCCTGGCGTTCATGCAGGGTGGCGTGACGAGTACGACGACTAATGTTGCGGCGACGACGGCCA
ATTCGGTTGCGCGTCAAGCTGGGATTCAAAAAGGTGATCAAATTGTCGCCGTCAATGGTAAAAAGATGACCAGTGCGCAG
TCGATTTCGCTCCTGATTCAAGACAGTCCCAAGCAACGGTTGCGTTTGACGATCAAACGTGATGGTCAAACCAAAAAAAT
TACGGTAACACCAGTTGCTAAGACGGTCTCTGGTAATCGCATCGGCCAAATCGGCGTGATGTGGGCGACGAAGACTGACA
AGAGTTTTGGTGCCAAATTGGCCTATGGTTTTACGGGCTCGTGGAATATCACCAAACAGATTTTTCAGGTCCTCGGCCGG
ATGGTCACGCATGGCTTCAGTTTGAACGATTTAGGTGGCCCGGTCGCTATCTTTGCCACGACCTCGCAAGCGGCTAAATC
AGGTCTGCGAACGGTGATTTATTTGCTGGCAGTCTTGTCGATCAACCTGGGAATTGTCAATTTATTACCAATTCCAGCCC
TCGATGGTGGTAAACTATTATTAAACATTGTTGAAGGCATTCGGGGTAAACCACTACGAGTGGAAACGGAAAGTGTCATT
ACCTTGATTGGTTTTGGCCTCTTGATGTTATTAATGATTTTAGTCACTTGGAATGATATCCAACGATATTTCTTCTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-411)

PDZ domain (PDZ_6)

(212-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

49.299

100

0.496
  eeP Streptococcus thermophilus LMD-9

49.065

100

0.494