Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   SPN032672_RS11050 Genome accession   NC_021003
Coordinates   2068530..2069180 (+) Length   216 a.a.
NCBI ID   WP_000387352.1    Uniprot ID   A0A4J1SCX2
Organism   Streptococcus pneumoniae SPN032672     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2063530..2074180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPN032672_RS11015 - 2064026..2064241 (+) 216 WP_001232078.1 YozE family protein -
  SPN032672_RS11020 - 2064327..2065295 (+) 969 WP_000658181.1 PhoH family protein -
  SPN032672_RS11025 - 2065475..2065975 (+) 501 WP_000566988.1 GNAT family N-acetyltransferase -
  SPN032672_RS11030 - 2065978..2066304 (+) 327 Protein_2078 TfoX/Sxy family protein -
  SPN032672_RS12585 ald 2066605..2067716 (-) 1112 Protein_2079 alanine dehydrogenase -
  SPN032672_RS11045 - 2067893..2068462 (+) 570 WP_000443745.1 GNAT family N-acetyltransferase -
  SPN032672_RS11050 comEA/celA/cilE 2068530..2069180 (+) 651 WP_000387352.1 helix-hairpin-helix domain-containing protein Machinery gene
  SPN032672_RS11055 comEC/celB 2069164..2071404 (+) 2241 WP_000942422.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  SPN032672_RS11060 - 2071584..2071772 (+) 189 WP_010976492.1 hypothetical protein -
  SPN032672_RS11065 - 2071804..2072391 (+) 588 WP_000933542.1 ATP-binding cassette domain-containing protein -
  SPN032672_RS11070 - 2072395..2073570 (+) 1176 WP_000655940.1 hypothetical protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 23085.30 Da        Isoelectric Point: 6.0661

>NTDB_id=57909 SPN032672_RS11050 WP_000387352.1 2068530..2069180(+) (comEA/celA/cilE) [Streptococcus pneumoniae SPN032672]
MEAIIEKIKEYKIIVICTGLGLLVGGFFLLKPAPQTSVKETNLQAEVAAVSKDSSTGKEVNKEEKEEPVEQDLITVDVKG
AVKSPGIYDLPVGSRVNDAVQKAGGLTEQADSKSLNLAQKVSDEALVYVPTKGEEAVSQQTGSGTASSTSKEKKVNLNKA
SLEELKQVKGLGGKRAQDIIDHREANGKFKSVDELKKVSGIGAKTIEKLKDYVTVD

Nucleotide


Download         Length: 651 bp        

>NTDB_id=57909 SPN032672_RS11050 WP_000387352.1 2068530..2069180(+) (comEA/celA/cilE) [Streptococcus pneumoniae SPN032672]
ATGGAAGCAATTATCGAGAAAATCAAAGAGTATAAAATCATCGTCATCTGTACTGGTCTGGGCTTGCTTGTAGGAGGATT
TTTCCTGCTAAAGCCAGCTCCACAAACATCTGTCAAAGAGACGAATTTGCAGGCTGAAGTTGCAGCTGTTTCCAAGGACT
CATCGACCGGAAAGGAAGTGAACAAGGAAGAGAAGGAAGAACCAGTTGAACAAGATCTAATCACAGTAGATGTCAAAGGT
GCTGTCAAATCGCCAGGGATTTATGACTTGCCTGTAGGTAGTCGAGTCAATGATGCTGTTCAGAAGGCTGGTGGCTTGAC
AGAGCAAGCAGACAGCAAGTCGCTCAATCTAGCTCAGAAAGTTAGTGATGAGGCTCTGGTTTACGTTCCTACTAAGGGAG
AAGAAGCAGTTAGTCAACAGACTGGTTCGGGGACAGCTTCTTCAACAAGCAAGGAAAAGAAGGTCAATCTCAACAAGGCC
AGTCTGGAAGAACTCAAGCAGGTCAAGGGACTGGGAGGAAAACGAGCTCAGGACATTATTGACCATCGTGAGGCAAATGG
CAAGTTCAAGTCAGTAGACGAGCTCAAGAAGGTCTCTGGCATTGGTGCCAAGACCATAGAAAAACTTAAAGACTATGTTA
CAGTGGATTAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(151-214)

SLBB domain (SLBB)

(76-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4J1SCX2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

97.685

100

0.977
  comEA/celA/cilE Streptococcus pneumoniae Rx1

95.833

100

0.958
  comEA/celA/cilE Streptococcus pneumoniae D39

95.833

100

0.958
  comEA/celA/cilE Streptococcus pneumoniae R6

95.833

100

0.958
  comEA/celA/cilE Streptococcus mitis NCTC 12261

95.37

100

0.954
  comEA/celA/cilE Streptococcus mitis SK321

92.593

100

0.926
  comEA Lactococcus lactis subsp. cremoris KW2

44.053

100

0.463
  comEA Latilactobacillus sakei subsp. sakei 23K

34.335

100

0.37

Multiple sequence alignment