Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   HU759_RS28700 Genome accession   NZ_CP077082
Coordinates   6357663..6358070 (-) Length   135 a.a.
NCBI ID   WP_010564379.1    Uniprot ID   A0A7Y8D5M8
Organism   Pseudomonas sp. OE 28.3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6352663..6363070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HU759_RS28685 (HU759_028685) - 6354666..6356717 (-) 2052 WP_017139440.1 methyl-accepting chemotaxis protein -
  HU759_RS28690 (HU759_028690) - 6356714..6357238 (-) 525 WP_017139441.1 chemotaxis protein CheW -
  HU759_RS28695 (HU759_028695) pilH 6357251..6357616 (-) 366 WP_017139442.1 twitching motility response regulator PilH -
  HU759_RS28700 (HU759_028700) pilG 6357663..6358070 (-) 408 WP_010564379.1 twitching motility response regulator PilG Regulator
  HU759_RS28705 (HU759_028705) gshB 6358310..6359263 (+) 954 WP_099550340.1 glutathione synthase -
  HU759_RS28710 (HU759_028710) - 6359341..6360246 (+) 906 WP_017139444.1 energy transducer TonB -
  HU759_RS28715 (HU759_028715) - 6360426..6360995 (+) 570 WP_017139445.1 YqgE/AlgH family protein -
  HU759_RS28720 (HU759_028720) ruvX 6360995..6361432 (+) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  HU759_RS28725 (HU759_028725) pyrR 6361515..6362021 (+) 507 WP_017139446.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  HU759_RS28730 (HU759_028730) - 6362046..6363050 (+) 1005 WP_056857699.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14906.40 Da        Isoelectric Point: 7.3842

>NTDB_id=578875 HU759_RS28700 WP_010564379.1 6357663..6358070(-) (pilG) [Pseudomonas sp. OE 28.3]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=578875 HU759_RS28700 WP_010564379.1 6357663..6358070(-) (pilG) [Pseudomonas sp. OE 28.3]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGATGATTCAAAAACGATCCGCCGCACCGCCGAGACGCTGTT
GAAGAACGTGGGCTGCGATGTGATCACGGCTATCGACGGTTTCGATGCCCTGGCCCGGATTGTTGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCTTCTAAAGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTTGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGCAATCAAGGCTTACGTGCCTGGGTTTGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8D5M8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363