Detailed information NTG0578600

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: J3992_RS17440
• Genome accession: NZ_CP077061
• Coordinates: 787646..788740 (+)
• Length: 364 a.a.
• NCBI ID: WP_000823678.1
• Uniprot ID: Q9KLK6
• Organism: Vibrio cholerae strain MS84A
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 782646..793740

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J3992_RS17410 (J3992_17390)	-	783789..784040 (-)	252	WP_001882582.1	YgjV family protein	-
J3992_RS17415 (J3992_17395)	-	784453..784773 (-)	321	WP_001089529.1	DUF496 family protein	-
J3992_RS17420 (J3992_17400)	-	784961..785158 (+)	198	WP_001246071.1	hypothetical protein	-
J3992_RS17425 (J3992_17405)	-	785200..785850 (+)	651	WP_001025631.1	YceH family protein	-
J3992_RS17430 (J3992_17410)	-	785867..786172 (+)	306	WP_000429067.1	GIY-YIG nuclease family protein	-
J3992_RS17435 (J3992_17415)	traF	786274..787434 (+)	1161	WP_001025860.1	conjugal transfer protein TraF	-
J3992_RS17440 (J3992_17420)	luxP	787646..788740 (+)	1095	WP_000823678.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
J3992_RS17445 (J3992_17425)	luxQ	788758..791331 (+)	2574	WP_001026306.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	Regulator
J3992_RS17450 (J3992_17430)	-	791323..791988 (-)	666	WP_000268204.1	flagellar brake protein	-
J3992_RS17455 (J3992_17435)	-	792232..792750 (-)	519	WP_000914961.1	hypothetical protein	-
J3992_RS17460 (J3992_17440)	-	793002..793400 (-)	399	WP_000831416.1	YgiW/YdeI family stress tolerance OB fold protein	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 41196.81 Da
• Isoelectric Point: 6.3129

>NTDB_id=578600 J3992_RS17440 WP_000823678.1 787646..788740(+) (luxP) [Vibrio cholerae strain MS84A]
MKRKLISPLFLIAALFSSTGQADSLKGYWHYDEFLAEFPEQRPISELFAQTVRDKPSALTVAQEQPVIISVVYPGQQISD
YWVRNIKAFEKRMDALGIRYQINQVFTRPNLDTRQQSVSLMEALKNKSDYLIFTLDTTRHRKFIEHVLHSSETKLILQNI
TTPVKDWQGKQPMMYIGFDHEYGAQLLAQYYQAHAPKKPYSVLYFSEGYISEARGDTFIQDMNAVHHFPLASSYYTKATE
QSGYEATLNIVKNNPEIGFIYACATDVALGAAQALKELNRQDILVNGWGGGSAELEALAKGELDVTVMRMNDDTGVAMAE
AIKWDLEGKSVPLVYSGDFEVVTKQDSAARIAELKARAFRYSDR

Nucleotide

• Length: 1095 bp

>NTDB_id=578600 J3992_RS17440 WP_000823678.1 787646..788740(+) (luxP) [Vibrio cholerae strain MS84A]
ATGAAAAGAAAGCTAATATCTCCGCTGTTTCTGATAGCAGCACTCTTCAGCTCAACTGGTCAAGCCGATTCATTAAAAGG
CTATTGGCATTATGATGAATTTCTTGCTGAGTTCCCTGAACAGCGGCCAATTTCCGAGCTTTTTGCTCAAACAGTTCGTG
ATAAACCGAGTGCGTTGACGGTGGCGCAAGAACAACCCGTCATTATTTCGGTGGTCTATCCCGGACAGCAAATTTCTGAC
TATTGGGTTCGCAACATCAAAGCGTTTGAAAAGCGAATGGATGCTTTGGGGATTCGCTATCAAATCAATCAGGTGTTTAC
TCGCCCGAATCTTGATACTCGCCAGCAGAGTGTTTCCTTGATGGAAGCGCTGAAAAATAAGAGCGACTATCTGATTTTTA
CCTTAGATACCACCCGTCACCGCAAATTCATTGAGCATGTGCTGCACTCCTCCGAAACGAAACTGATTTTGCAAAACATC
ACGACGCCAGTCAAAGATTGGCAAGGCAAGCAGCCCATGATGTACATCGGTTTTGATCATGAGTACGGTGCGCAATTATT
GGCGCAATATTACCAAGCACATGCTCCGAAAAAGCCGTACTCAGTACTTTATTTTTCCGAGGGGTATATCAGTGAAGCGC
GGGGAGACACCTTCATTCAAGATATGAACGCGGTGCACCATTTTCCGTTGGCTTCTTCCTATTACACCAAGGCAACCGAA
CAAAGTGGCTATGAAGCGACCCTAAACATCGTCAAGAATAATCCAGAAATTGGCTTTATTTACGCCTGTGCGACGGACGT
CGCTTTGGGAGCTGCGCAGGCACTGAAAGAGCTGAATCGACAAGATATTCTGGTCAATGGTTGGGGAGGCGGTTCGGCAG
AGCTTGAAGCGCTTGCCAAAGGAGAATTGGATGTCACTGTGATGCGTATGAATGACGATACGGGTGTGGCGATGGCTGAA
GCGATTAAATGGGATTTGGAAGGGAAATCCGTACCTTTGGTCTATTCAGGCGATTTTGAAGTGGTCACCAAACAAGATTC
AGCAGCACGTATTGCAGAACTGAAAGCTCGGGCTTTCCGTTATTCGGATCGTTAG

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-323)

3D structure

• AlphaFold DB: Q9KLK6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	100	100	1