Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SPN032672_RS04475 Genome accession   NC_021003
Coordinates   840424..841182 (-) Length   252 a.a.
NCBI ID   WP_000410378.1    Uniprot ID   A0A064C0A8
Organism   Streptococcus pneumoniae SPN032672     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 835424..846182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPN032672_RS04450 pth 835457..836026 (-) 570 WP_000163931.1 aminoacyl-tRNA hydrolase -
  SPN032672_RS04455 ychF 836097..837212 (-) 1116 WP_001218706.1 redox-regulated ATPase YchF -
  SPN032672_RS04460 - 837296..837490 (-) 195 WP_000285194.1 DUF951 domain-containing protein -
  SPN032672_RS04465 dnaN 837555..838691 (-) 1137 WP_000581157.1 DNA polymerase III subunit beta -
  SPN032672_RS04470 dnaA 838850..840211 (-) 1362 WP_000660618.1 chromosomal replication initiator protein DnaA -
  SPN032672_RS04475 spo0J 840424..841182 (-) 759 WP_000410378.1 ParB/RepB/Spo0J family partition protein Regulator
  SPN032672_RS04480 htrA 841240..842421 (-) 1182 WP_000681598.1 S1C family serine protease Regulator
  SPN032672_RS04485 rlmH 842604..843083 (+) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SPN032672_RS04495 comC/comC1 843365..843490 (+) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  SPN032672_RS04500 comD/comD1 843511..844836 (+) 1326 WP_000362880.1 competence system sensor histidine kinase ComD Regulator
  SPN032672_RS04505 comE 844833..845585 (+) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29153.50 Da        Isoelectric Point: 9.0667

>NTDB_id=57858 SPN032672_RS04475 WP_000410378.1 840424..841182(-) (spo0J) [Streptococcus pneumoniae SPN032672]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=57858 SPN032672_RS04475 WP_000410378.1 840424..841182(-) (spo0J) [Streptococcus pneumoniae SPN032672]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTTTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
ATTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A064C0A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment