Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   MUA64_RS06300 Genome accession   NZ_CP094745
Coordinates   1281147..1282019 (+) Length   290 a.a.
NCBI ID   WP_000620184.1    Uniprot ID   -
Organism   Staphylococcus aureus strain IVB6250     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1276147..1287019
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MUA64_RS06280 (MUA64_06280) sucC 1276262..1277428 (+) 1167 WP_045178815.1 ADP-forming succinate--CoA ligase subunit beta -
  MUA64_RS06285 (MUA64_06285) sucD 1277450..1278358 (+) 909 WP_000110252.1 succinate--CoA ligase subunit alpha -
  MUA64_RS06290 (MUA64_06290) - 1278585..1279703 (+) 1119 WP_250396345.1 LysM peptidoglycan-binding domain-containing protein -
  MUA64_RS06295 (MUA64_06295) fmhC 1279731..1280975 (+) 1245 WP_252559172.1 FemA/FemB family glycyltransferase FmhC -
  MUA64_RS06300 (MUA64_06300) dprA 1281147..1282019 (+) 873 WP_000620184.1 DNA-processing protein DprA Machinery gene
  MUA64_RS06305 (MUA64_06305) topA 1282193..1284268 (+) 2076 WP_001557331.1 type I DNA topoisomerase -
  MUA64_RS06310 (MUA64_06310) trmFO 1284424..1285731 (+) 1308 WP_045178813.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33547.97 Da        Isoelectric Point: 9.5241

>NTDB_id=578345 MUA64_RS06300 WP_000620184.1 1281147..1282019(+) (dprA) [Staphylococcus aureus strain IVB6250]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEGGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYRGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEIGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=578345 MUA64_RS06300 WP_000620184.1 1281147..1282019(+) (dprA) [Staphylococcus aureus strain IVB6250]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATACCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGATATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAGAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTGCAAGAGATTCTACAAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGCACATTAGC
ATTAAGAAATAAAATAGAAGAAATAGGTTTAGTTATATCCGAATATCCACCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGCAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGTAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGTGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterProScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.276

100

0.983
  dprA Staphylococcus aureus N315

97.931

100

0.979