Detailed information NTG0578022

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: KQ252_RS14810
• Genome accession: NZ_CP076801
• Coordinates: 3097234..3098352 (-)
• Length: 372 a.a.
• NCBI ID: WP_000347039.1
• Uniprot ID: A0A9P2XLL8
• Organism: Acinetobacter baumannii strain UC25604
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3092234..3103352

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQ252_RS14780 (KQ252_14745)	-	3093063..3093911 (+)	849	WP_000336554.1	class II glutamine amidotransferase	-
KQ252_RS14785 (KQ252_14750)	-	3094164..3094619 (+)	456	WP_000782976.1	bacteriohemerythrin	-
KQ252_RS14790 (KQ252_14755)	-	3094772..3095839 (+)	1068	WP_045901053.1	membrane protein	-
KQ252_RS14795 (KQ252_14760)	-	3095839..3096162 (+)	324	WP_045901052.1	RnfH family protein	-
KQ252_RS14800 (KQ252_14765)	-	3096217..3096615 (-)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
KQ252_RS14805 (KQ252_14770)	fur	3096727..3097164 (+)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
KQ252_RS14810 (KQ252_14775)	pilU	3097234..3098352 (-)	1119	WP_000347039.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
KQ252_RS14815 (KQ252_14780)	pilT	3098380..3099417 (-)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
KQ252_RS14820 (KQ252_14785)	-	3099544..3100236 (+)	693	WP_045901049.1	YggS family pyridoxal phosphate-dependent enzyme	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41933.13 Da
• Isoelectric Point: 6.6944

>NTDB_id=578022 KQ252_RS14810 WP_000347039.1 3097234..3098352(-) (pilU) [Acinetobacter baumannii strain UC25604]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRREFAETRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=578022 KQ252_RS14810 WP_000347039.1 3097234..3098352(-) (pilU) [Acinetobacter baumannii strain UC25604]
ATGGATTTTAATGACCTGCTCAACCTGATGGTTGAAAAAAAATCATCGGATCTTTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAATGGGCAAATTGTTCCAATTTCAAAAAACAGTCTTTCTGGGGAAGTGATTGGTCAACTGTTACATTCCA
TCATGAGTGAAAAACAACGCAGAGAATTTGCAGAAACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCGCCTGTACTTAAAGATTTATCGATGACCAAACGCGGCATTATTATTTTCGTAGGCGCAACAG
GTACAGGTAAATCCACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTCATCTTAATTGGTGAGATTCGTTCTCGTGAAGTCATGGACT
ATGCGATTGGCTTTGCTGAAACAGGTCACCTTGTATTAGCTACCATGCACGCTAACAACGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGATCGTCATAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCTATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCTGATGAGGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACCTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (31-270)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.926	100	0.772
pilU	Pseudomonas stutzeri DSM 10701	69.565	98.925	0.688
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.486	93.011	0.395