Detailed information NTG0577942

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: MTO79_RS11675
• Genome accession: NZ_CP094474
• Coordinates: 2291817..2292893 (+)
• Length: 358 a.a.
• NCBI ID: WP_010906242.1
• Uniprot ID: Q9CE70
• Organism: Lactococcus lactis strain SCB469
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2286817..2297893

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MTO79_RS11650 (MTO79_11650)	pgsA	2286977..2287549 (-)	573	WP_004254763.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
MTO79_RS11655 (MTO79_11655)	-	2287590..2288486 (-)	897	WP_004254758.1	RodZ family helix-turn-helix domain-containing protein	-
MTO79_RS11660 (MTO79_11660)	-	2288698..2289981 (-)	1284	WP_004254752.1	pitrilysin family protein	-
MTO79_RS11665 (MTO79_11665)	-	2289971..2291257 (-)	1287	WP_021214872.1	pitrilysin family protein	-
MTO79_RS11670 (MTO79_11670)	yaaA	2291455..2291817 (+)	363	WP_004254746.1	S4 domain-containing protein YaaA	-
MTO79_RS11675 (MTO79_11675)	recF	2291817..2292893 (+)	1077	WP_010906242.1	DNA replication/repair protein RecF	Machinery gene
MTO79_RS11680 (MTO79_11680)	-	2292980..2293348 (-)	369	WP_004254740.1	carboxymuconolactone decarboxylase family protein	-
MTO79_RS11685 (MTO79_11685)	-	2293426..2293803 (+)	378	WP_010906243.1	MerR family transcriptional regulator	-
MTO79_RS11690 (MTO79_11690)	-	2293816..2294760 (-)	945	WP_010906244.1	alpha/beta hydrolase	-
MTO79_RS11695 (MTO79_11695)	galE	2294883..2295863 (-)	981	WP_010906245.1	UDP-glucose 4-epimerase GalE	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 41356.23 Da
• Isoelectric Point: 6.8652

>NTDB_id=577942 MTO79_RS11675 WP_010906242.1 2291817..2292893(+) (recF) [Lactococcus lactis strain SCB469]
MKLKAIELKNFRNYEELKLDFHPNLNIFLGQNAQGKTNILEAIHFLALTRSHRTSHDKELISWSQQEMKVSGVVEKAHAT
VPLEVQLSPKGRIAKANHLKENRLADYIGQLKILMFAPENLELVKGSPATRRKFMDIELGQIHAVYLYDSMRYNRALKER
NAYLKFDKDKIDKNFLSVLDGQLAEHGNKIMLERQNFIDKLEVHAKKIHEQLTHGKENLKIIYNQNVKTDFSKELLSRQD
HDIFRHQTSVGPHRDDLQFFINEINVADFGSQGQQRTVALSIKLAEIDLIFEETGEYPILLLDDVMSELDNHRQLDLIET
SLGKTQTFITTTTLDHLKNLPENLSIFHVNAGTIEQEQ

Nucleotide

• Length: 1077 bp

>NTDB_id=577942 MTO79_RS11675 WP_010906242.1 2291817..2292893(+) (recF) [Lactococcus lactis strain SCB469]
ATGAAACTCAAAGCAATTGAACTCAAAAATTTTCGTAATTATGAGGAATTAAAACTTGATTTTCACCCTAATCTCAATAT
TTTTTTAGGACAAAATGCTCAAGGGAAAACAAATATTCTTGAGGCGATTCATTTTTTAGCACTCACTCGTAGTCACAGAA
CAAGTCACGACAAAGAGCTCATTTCTTGGTCACAACAAGAAATGAAGGTCTCAGGAGTCGTTGAAAAAGCTCATGCAACT
GTTCCACTTGAAGTTCAATTAAGTCCCAAAGGGAGAATTGCTAAAGCCAATCATCTCAAAGAAAATCGCTTAGCCGACTA
CATTGGTCAACTAAAAATCTTGATGTTTGCACCTGAAAATTTGGAATTAGTCAAAGGTTCTCCAGCTACCCGCAGAAAAT
TTATGGATATTGAACTGGGACAAATCCATGCGGTTTACCTTTATGATTCCATGCGATATAATCGTGCGTTAAAAGAACGG
AATGCTTACTTAAAATTTGATAAAGACAAAATTGATAAAAATTTTTTAAGTGTTCTTGACGGACAATTAGCTGAACATGG
TAATAAAATCATGCTTGAGCGGCAAAATTTTATTGATAAACTTGAAGTTCATGCAAAAAAAATCCATGAGCAACTTACTC
ATGGTAAAGAAAATTTAAAAATCATTTATAATCAAAATGTGAAAACTGACTTTTCAAAAGAATTATTGAGCAGACAAGAC
CATGATATTTTTAGGCATCAAACATCGGTTGGCCCTCATCGTGACGATTTACAATTTTTTATCAATGAGATTAATGTTGC
TGATTTTGGTAGTCAAGGACAACAACGAACCGTTGCTCTCTCAATTAAATTAGCAGAAATTGATTTAATTTTTGAAGAGA
CTGGTGAGTATCCGATTTTACTTTTAGATGATGTCATGAGTGAATTAGACAATCATCGTCAACTTGATTTGATTGAAACA
AGTTTGGGTAAAACACAAACTTTTATAACTACAACTACTCTTGATCATCTTAAAAATTTACCTGAAAATCTGAGTATTTT
CCATGTTAATGCTGGAACCATTGAACAAGAGCAATAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-353)

3D structure

• AlphaFold DB: Q9CE70

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	55	100	0.553
recF	Bacillus subtilis subsp. subtilis str. 168	45.977	97.207	0.447