Detailed information NTG0577794

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: KP952_RS19745
• Genome accession: NZ_CP076731
• Coordinates: 3717643..3718788 (+)
• Length: 381 a.a.
• NCBI ID: WP_069837832.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis strain Miz-8
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3712643..3723788

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KP952_RS19725 (KP952_19725)	albF	3712663..3713943 (+)	1281	WP_069837829.1	M16 family metallopeptidase	-
KP952_RS19730 (KP952_19730)	albG	3713940..3714641 (+)	702	WP_069837830.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
KP952_RS19735 (KP952_19735)	ywhL	3714647..3716023 (-)	1377	WP_069837831.1	YncE family protein	-
KP952_RS19740 (KP952_19740)	ywhK	3716062..3717413 (-)	1352	Protein_3860	YncE family protein	-
KP952_RS22180	-	3717410..3717640 (-)	231	Protein_3861	hypothetical protein	-
KP952_RS19745 (KP952_19745)	rapF	3717643..3718788 (+)	1146	WP_069837832.1	response regulator aspartate phosphatase RapF	Regulator
KP952_RS19750 (KP952_19750)	phrF	3718772..3718891 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
KP952_RS19755 (KP952_19755)	-	3718989..3719416 (+)	428	Protein_3864	YbaK/EbsC family protein	-
KP952_RS19760 (KP952_19760)	speB	3719481..3720353 (-)	873	WP_003227545.1	agmatinase	-
KP952_RS19765 (KP952_19765)	speE	3720414..3721244 (-)	831	WP_003227543.1	spermidine synthase	-
KP952_RS19770 (KP952_19770)	pbpG	3721446..3723521 (+)	2076	WP_069837833.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45624.07 Da
• Isoelectric Point: 5.0624

>NTDB_id=577794 KP952_RS19745 WP_069837832.1 3717643..3718788(+) (rapF) [Bacillus subtilis subsp. subtilis strain Miz-8]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKENEAYNIRLLQCHSLFATNFLDLKQYEDAVSHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFTIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=577794 KP952_RS19745 WP_069837832.1 3717643..3718788(+) (rapF) [Bacillus subtilis subsp. subtilis strain Miz-8]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACAGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGATCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAAAATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCGTCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGAAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACATATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCACTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	98.688	100	0.987
rapC	Bacillus subtilis subsp. subtilis str. 168	57.105	99.738	0.57