Detailed information NTG0577607

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: KQ224_RS09635
• Genome accession: NZ_CP076721
• Coordinates: 1862815..1863858 (+)
• Length: 347 a.a.
• NCBI ID: WP_171989134.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain H35
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1857815..1868858

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KQ224_RS09615 (KQ224_09615)	-	1858323..1858709 (+)	387	WP_171989137.1	VOC family protein	-
KQ224_RS09620 (KQ224_09620)	-	1859127..1860773 (+)	1647	WP_174845523.1	peptide ABC transporter substrate-binding protein	-
KQ224_RS09625 (KQ224_09625)	-	1860844..1861758 (+)	915	WP_171989135.1	ABC transporter permease	-
KQ224_RS09630 (KQ224_09630)	-	1861769..1862800 (+)	1032	WP_174845522.1	ABC transporter permease	-
KQ224_RS09635 (KQ224_09635)	oppD	1862815..1863858 (+)	1044	WP_171989134.1	ABC transporter ATP-binding protein	Regulator
KQ224_RS09640 (KQ224_09640)	amiF	1863855..1864790 (+)	936	WP_216806515.1	ABC transporter ATP-binding protein	Regulator
KQ224_RS09645 (KQ224_09645)	-	1864846..1865214 (-)	369	WP_253952818.1	DUF3397 domain-containing protein	-
KQ224_RS09650 (KQ224_09650)	rplK	1865369..1865794 (+)	426	WP_024382554.1	50S ribosomal protein L11	-
KQ224_RS09655 (KQ224_09655)	rplA	1865835..1866524 (+)	690	WP_216806516.1	50S ribosomal protein L1	-
KQ224_RS09660 (KQ224_09660)	-	1866630..1866920 (+)	291	WP_171989863.1	hypothetical protein	-
KQ224_RS09665 (KQ224_09665)	yghU	1866929..1867717 (+)	789	WP_216806517.1	glutathione-dependent disulfide-bond oxidoreductase	-

Sequence

Protein

• Length: 347 a.a.
• Molecular weight: 38377.95 Da
• Isoelectric Point: 5.0184

>NTDB_id=577607 KQ224_RS09635 WP_171989134.1 1862815..1863858(+) (oppD) [Streptococcus parasuis strain H35]
MNKETILQVENLNVTFHTYAGEVKAIRDVSFTLNKGETLAIVGESGSGKSVTTRTLMGLNAKNAHLSGKIHFKDKDLSEL
SESEWVKVRGNEIAMIFQDPMTSLDPTMTIGMQIAEPIMLHEKVSKSEALKRALELMKKVGIPNAEEHIKDYPHQWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQAQILNLMKEIQSQTQSSIIFITHDLGVVAGMADRVAVMYAGKIVEVGTV
EEVFYNPQHPYTWGLLNSMPTTETASGSLESIPGTPPDLLNPPVGDAFAARNAYALDIDFEEQPPMFQISDSHYAATWLL
DERAPEITPPLAILKRWEKWNSKKEKQ

Nucleotide

• Length: 1044 bp

>NTDB_id=577607 KQ224_RS09635 WP_171989134.1 1862815..1863858(+) (oppD) [Streptococcus parasuis strain H35]
ATGAATAAAGAAACGATTTTACAAGTTGAAAATTTAAATGTTACCTTTCATACCTATGCAGGTGAAGTCAAGGCGATTCG
TGATGTCAGTTTTACTTTGAACAAAGGAGAGACTCTGGCTATTGTTGGAGAGTCAGGTTCAGGTAAATCAGTAACAACAC
GTACGCTAATGGGCTTAAATGCAAAAAATGCACATTTGTCAGGTAAGATTCATTTTAAAGATAAAGACTTGAGCGAGTTG
TCAGAGAGTGAGTGGGTAAAAGTTCGTGGAAATGAAATTGCCATGATTTTCCAAGATCCAATGACAAGTTTAGATCCAAC
AATGACCATTGGAATGCAAATTGCTGAGCCAATTATGTTGCACGAAAAAGTATCGAAATCTGAGGCTTTGAAACGTGCTT
TGGAGCTCATGAAGAAGGTTGGTATTCCAAATGCTGAGGAGCACATTAAAGATTATCCACATCAGTGGTCAGGTGGGATG
CGTCAACGTGCAGTCATTGCGATTGCACTTGCAGCGAATCCAGAAATTCTAATTGCGGATGAACCAACAACTGCCTTAGA
CGTGACGATTCAAGCGCAAATTTTGAATTTGATGAAAGAAATACAGTCTCAAACACAGTCTTCTATTATCTTTATTACCC
ATGATTTGGGTGTGGTAGCTGGTATGGCAGACCGTGTAGCTGTTATGTATGCAGGGAAGATTGTGGAAGTTGGAACGGTT
GAGGAAGTATTTTATAATCCGCAACATCCTTACACATGGGGGTTATTAAACTCTATGCCGACAACAGAGACTGCTTCTGG
AAGTTTGGAATCCATTCCTGGAACTCCGCCAGATTTGTTGAACCCTCCTGTTGGAGATGCTTTTGCAGCCAGAAATGCAT
ATGCTCTCGATATTGATTTTGAAGAGCAACCGCCAATGTTCCAAATTTCAGATAGCCATTATGCAGCAACATGGTTGTTA
GATGAGCGAGCTCCTGAAATTACACCACCGTTAGCAATCTTGAAACGTTGGGAAAAATGGAATAGTAAGAAGGAGAAACA
ATGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (27-183)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-296)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	81.579	98.559	0.804
amiE	Streptococcus salivarius strain HSISS4	56.765	97.983	0.556
amiE	Streptococcus thermophilus LMG 18311	56.471	97.983	0.553
amiE	Streptococcus thermophilus LMD-9	56.471	97.983	0.553