Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   KRG72_RS05385 Genome accession   NZ_CP076703
Coordinates   1072840..1074654 (-) Length   604 a.a.
NCBI ID   WP_258250159.1    Uniprot ID   -
Organism   Streptococcus equinus strain S1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1067840..1079654
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS05365 (KRG72_05370) - 1068424..1069650 (-) 1227 WP_093814667.1 HAMP domain-containing sensor histidine kinase -
  KRG72_RS05370 (KRG72_05375) - 1069659..1070339 (-) 681 WP_074602153.1 response regulator transcription factor -
  KRG72_RS05375 (KRG72_05380) - 1070345..1070977 (-) 633 WP_258250157.1 GTP pyrophosphokinase family protein -
  KRG72_RS05380 (KRG72_05385) rcrQ 1071078..1072850 (-) 1773 WP_258250158.1 ABC transporter ATP-binding protein Regulator
  KRG72_RS05385 (KRG72_05390) rcrP 1072840..1074654 (-) 1815 WP_258250159.1 ABC transporter ATP-binding protein Regulator
  KRG72_RS05390 (KRG72_05395) rcrR 1074658..1075098 (-) 441 WP_039696758.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  KRG72_RS05395 (KRG72_05400) - 1075244..1075654 (-) 411 WP_074602165.1 peptide deformylase -
  KRG72_RS05400 (KRG72_05405) - 1075651..1076160 (-) 510 WP_258250160.1 GNAT family N-acetyltransferase -
  KRG72_RS05405 (KRG72_05410) gdhA 1076317..1077666 (-) 1350 WP_039696755.1 NADP-specific glutamate dehydrogenase -
  KRG72_RS05410 (KRG72_05415) - 1077902..1078399 (+) 498 WP_258250161.1 DUF308 domain-containing protein -
  KRG72_RS05415 (KRG72_05420) queF 1078436..1078927 (-) 492 WP_039696752.1 preQ(1) synthase -

Sequence

Protein


Download         Length: 604 a.a.        Molecular weight: 67124.08 Da        Isoelectric Point: 5.5856

>NTDB_id=577466 KRG72_RS05385 WP_258250159.1 1072840..1074654(-) (rcrP) [Streptococcus equinus strain S1]
MLKIFKRLTAKEIIMMIIAVLFVCLNVFLDLKIPDYMSDITSLLSTQGTKAKDIFAWNLDAPGMRMVLLSLGSFAASVVV
GFLAARIAASFSTRLRDDIFHSVLDFSDAEIKKFSIPSLLTRTTNDITQIQLVFTMGLQVITKGPIMAIWAITKIADKNH
EWLMVLVVAVAVMILMLIFLLMMVMPKQRMIQKLTDKLNSITRESLTGIRVVRAYNAESYQDGKFAKANDNVTNFNLFIN
RSMALMSPVMTSISSGMTLAIYWIGAFLIEDIAIPKDPTKIAGAMQDKVNIFSDMVVYSSYAMQVVIGFMMMIIVFFILP
RAVVAAGRINEVLDTKPSVLYPEESKVQPAEKASVEFDDVSFRYSDHSEAVLEHVSFKAKAGDTVAFIGSTGSGKSTLVN
LIPRFYDATEGTIKVDGVDVRDYDHDTLHKIVGYIPQKAVLFSGDIASNMDMGDSNSSPLDDDKMWEALDLAQGRDFVES
KEGQLKAQVSQGGQNFSGGQKQRLAIARALARKPEIIIFDDSFSALDYKTDRILRSQLKERTADMTKLIVAQRISTIMDA
DQILVLDEGKVVGQGTHEELLANNEVYREIAYSQLSKEELENGK

Nucleotide


Download         Length: 1815 bp        

>NTDB_id=577466 KRG72_RS05385 WP_258250159.1 1072840..1074654(-) (rcrP) [Streptococcus equinus strain S1]
ATGTTAAAAATTTTTAAACGTTTAACGGCAAAAGAAATCATCATGATGATTATCGCCGTCTTATTTGTGTGTTTGAATGT
TTTCTTGGATTTGAAAATTCCAGATTACATGTCTGATATCACATCCTTGCTCTCGACTCAAGGAACAAAAGCAAAAGATA
TTTTTGCTTGGAATCTAGATGCCCCAGGTATGCGTATGGTCTTGCTTTCTTTAGGAAGTTTTGCAGCCTCTGTAGTTGTC
GGATTCTTAGCCGCACGTATTGCAGCAAGTTTCAGTACGCGTTTGCGTGATGATATTTTCCATAGTGTTTTGGACTTTTC
AGATGCGGAAATCAAGAAATTTTCAATTCCAAGTCTTTTGACACGTACAACAAATGACATTACTCAAATTCAGTTGGTCT
TTACCATGGGACTTCAAGTTATTACCAAAGGACCAATTATGGCAATCTGGGCAATCACGAAGATTGCTGATAAAAACCAT
GAGTGGTTGATGGTGCTGGTTGTAGCAGTGGCTGTCATGATTTTGATGTTGATTTTCTTGCTCATGATGGTAATGCCCAA
GCAACGCATGATTCAAAAATTAACCGATAAATTGAACAGTATCACGCGTGAATCATTGACTGGTATCCGTGTTGTTCGTG
CATACAATGCCGAAAGTTATCAAGATGGTAAATTTGCCAAAGCCAATGATAACGTGACAAACTTTAACCTCTTTATCAAC
CGTTCAATGGCTTTGATGTCGCCAGTTATGACAAGTATTTCAAGTGGGATGACTTTGGCCATTTATTGGATCGGTGCCTT
CTTGATTGAGGATATTGCCATTCCAAAAGACCCAACTAAGATTGCTGGTGCCATGCAAGATAAGGTAAATATTTTCTCAG
ATATGGTGGTTTATTCATCATATGCCATGCAGGTGGTTATTGGATTTATGATGATGATTATTGTCTTCTTCATTCTTCCC
CGTGCAGTTGTTGCTGCTGGTCGTATCAATGAAGTTTTAGATACAAAACCATCAGTACTTTATCCAGAAGAAAGTAAAGT
TCAACCAGCCGAAAAAGCTTCTGTAGAATTTGATGATGTGTCTTTCCGATATAGCGATCACTCAGAAGCTGTTTTGGAAC
ATGTTTCCTTCAAAGCTAAAGCAGGTGATACGGTTGCCTTTATCGGATCAACAGGTTCTGGTAAATCAACGTTGGTAAAC
TTGATTCCTCGTTTCTACGATGCAACAGAAGGAACAATCAAGGTAGATGGTGTTGATGTTCGTGATTACGATCATGACAC
CCTTCACAAGATTGTTGGTTACATTCCGCAAAAAGCTGTGCTCTTTAGTGGAGACATTGCTTCAAATATGGACATGGGTG
ACAGCAATAGTTCACCGCTTGATGATGACAAGATGTGGGAAGCACTTGATTTGGCACAAGGTAGAGACTTCGTCGAAAGT
AAAGAAGGGCAACTTAAGGCTCAAGTATCTCAAGGTGGTCAAAACTTCTCAGGTGGTCAAAAACAACGTTTGGCAATTGC
TCGTGCGCTTGCCCGAAAACCTGAAATTATCATCTTTGATGATTCATTCTCAGCTCTTGACTATAAGACTGACCGAATCC
TTCGTTCACAATTAAAAGAACGTACAGCAGATATGACAAAATTGATTGTTGCCCAACGTATTTCAACAATCATGGATGCT
GATCAAATCTTAGTCTTGGATGAAGGAAAAGTAGTTGGTCAAGGTACTCACGAAGAATTGCTTGCAAATAATGAAGTTTA
TCGTGAAATTGCCTACTCACAATTATCTAAGGAGGAATTAGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(372-522)

ABC transporter transmembrane region (ABC_membrane)

(16-270)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

66.942

100

0.671