Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   KRG72_RS05380 Genome accession   NZ_CP076703
Coordinates   1071078..1072850 (-) Length   590 a.a.
NCBI ID   WP_258250158.1    Uniprot ID   -
Organism   Streptococcus equinus strain S1     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1066078..1077850
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KRG72_RS05355 (KRG72_05360) - 1066556..1067470 (+) 915 WP_074602145.1 LysR family transcriptional regulator -
  KRG72_RS05360 (KRG72_05365) - 1067536..1068381 (+) 846 WP_133017927.1 aldo/keto reductase -
  KRG72_RS05365 (KRG72_05370) - 1068424..1069650 (-) 1227 WP_093814667.1 HAMP domain-containing sensor histidine kinase -
  KRG72_RS05370 (KRG72_05375) - 1069659..1070339 (-) 681 WP_074602153.1 response regulator transcription factor -
  KRG72_RS05375 (KRG72_05380) - 1070345..1070977 (-) 633 WP_258250157.1 GTP pyrophosphokinase family protein -
  KRG72_RS05380 (KRG72_05385) rcrQ 1071078..1072850 (-) 1773 WP_258250158.1 ABC transporter ATP-binding protein Regulator
  KRG72_RS05385 (KRG72_05390) rcrP 1072840..1074654 (-) 1815 WP_258250159.1 ABC transporter ATP-binding protein Regulator
  KRG72_RS05390 (KRG72_05395) rcrR 1074658..1075098 (-) 441 WP_039696758.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  KRG72_RS05395 (KRG72_05400) - 1075244..1075654 (-) 411 WP_074602165.1 peptide deformylase -
  KRG72_RS05400 (KRG72_05405) - 1075651..1076160 (-) 510 WP_258250160.1 GNAT family N-acetyltransferase -
  KRG72_RS05405 (KRG72_05410) gdhA 1076317..1077666 (-) 1350 WP_039696755.1 NADP-specific glutamate dehydrogenase -

Sequence

Protein


Download         Length: 590 a.a.        Molecular weight: 65289.42 Da        Isoelectric Point: 5.0497

>NTDB_id=577465 KRG72_RS05380 WP_258250158.1 1071078..1072850(-) (rcrQ) [Streptococcus equinus strain S1]
MENKKKVSFYGRMKPYIKGFQFPFVLAVIGAIISATVTVIGPDKLKEITNTIMKGLTPTKMGTIPGVDLDKVGQIALTLA
ILYVISAVVGYIQNFTVATIVQRFSQRLRAAIQVKIDRVPLNYFDSHSQGDTLSRVTNDVDLLGQSLNQSLGTLVTSVVL
LIGSIFMMFHSNVSMALTAIGSVFIGFLLVVVIMGSSQPLFKRQQNNLAAVNGYVEEIYSGHNVVTSYNASEETSEAFKK
LNTNLYKSMWQSQFLSGIMMPLMIFIGNFGYVMVCVVGAVKVINGDITMGDVVAFMTYVRIFSQPLSQIAQAFTQMQSAT
AAMSRVFEFLEEEEMEDESHKERQLSDVKGEVTFDNVFFGYSKDKTIIHDFSAVAKPGQKVAIVGPTGAGKTTIVNLLMK
FYEIDKGQIAIDGVDTRLMSREEVHDQFSMVLQDTWLFEGTIKENLIYNQENITDEQVVAAAKAVGVHHFIMTLPDGYDT
YLDDSVTLSIGQKQLLTIARALLKDAPLLILDEATSSVDTRTEELIQKAMDKLMEGRTSFVIAHRLSTIKNADLILVMKD
GNIIEQGSHDELMTEGGFYADLYNSQFEVA

Nucleotide


Download         Length: 1773 bp        

>NTDB_id=577465 KRG72_RS05380 WP_258250158.1 1071078..1072850(-) (rcrQ) [Streptococcus equinus strain S1]
ATGGAAAATAAGAAAAAAGTATCCTTCTATGGCAGAATGAAGCCATATATCAAAGGTTTCCAATTTCCATTTGTCCTTGC
GGTAATTGGAGCCATAATCTCAGCGACTGTTACTGTTATCGGTCCTGATAAATTAAAAGAAATTACAAATACCATTATGA
AAGGCTTGACACCAACTAAAATGGGGACTATCCCTGGTGTTGACCTAGATAAGGTTGGACAAATTGCTTTAACCCTTGCC
ATTTTATATGTGATTTCTGCAGTTGTTGGTTACATTCAAAACTTTACAGTAGCTACCATCGTTCAACGTTTCTCTCAACG
TTTGCGTGCAGCTATCCAAGTTAAAATTGACCGTGTGCCGCTAAATTATTTTGACAGTCATTCACAAGGGGATACCCTTT
CTCGTGTAACAAATGACGTGGATTTGCTTGGTCAATCTCTTAACCAAAGTTTGGGAACATTGGTCACTTCAGTAGTGCTT
TTGATTGGTTCGATTTTCATGATGTTCCATTCAAATGTCAGCATGGCGCTAACAGCAATTGGGTCAGTCTTTATCGGCTT
CTTGCTAGTTGTTGTGATTATGGGGTCATCTCAACCATTGTTTAAACGCCAACAAAATAACTTGGCAGCAGTCAATGGTT
ATGTCGAAGAAATTTATTCTGGACACAATGTGGTAACAAGTTACAACGCCTCTGAAGAAACAAGTGAAGCCTTTAAGAAA
CTAAATACAAATCTTTACAAATCAATGTGGCAATCACAATTCTTATCAGGTATTATGATGCCGCTCATGATTTTCATTGG
TAACTTTGGTTATGTTATGGTCTGTGTGGTTGGTGCAGTTAAGGTGATTAATGGCGATATTACCATGGGTGATGTGGTTG
CCTTTATGACTTACGTGCGCATTTTCTCACAACCTCTTTCTCAAATCGCTCAAGCATTCACACAAATGCAATCAGCAACA
GCTGCTATGAGCCGAGTCTTTGAATTTCTTGAAGAAGAGGAAATGGAAGATGAATCACACAAAGAACGTCAATTGTCTGA
TGTTAAAGGTGAAGTTACCTTTGATAATGTCTTCTTTGGTTATTCTAAAGATAAAACCATTATCCATGATTTCTCTGCCG
TGGCAAAACCTGGTCAAAAGGTTGCTATCGTTGGACCAACTGGTGCTGGTAAGACAACCATCGTTAACCTTCTTATGAAA
TTCTATGAAATCGATAAAGGTCAAATTGCCATTGACGGTGTTGACACACGTTTGATGTCACGAGAAGAAGTCCATGACCA
ATTCTCAATGGTGCTTCAGGATACTTGGCTCTTTGAAGGAACAATCAAAGAAAACTTGATTTATAACCAAGAAAATATCA
CTGATGAACAAGTAGTAGCAGCAGCTAAAGCAGTTGGTGTTCACCACTTTATCATGACGCTTCCTGATGGCTATGACACA
TACCTTGATGATTCTGTTACCCTTTCAATCGGTCAAAAACAACTCTTGACCATTGCGCGTGCCCTCTTGAAAGATGCTCC
GCTTCTTATTCTAGATGAAGCAACATCATCAGTTGATACACGTACGGAAGAATTGATTCAAAAAGCCATGGATAAATTGA
TGGAAGGTCGCACATCATTTGTGATTGCCCACCGTTTATCAACGATCAAGAATGCTGATTTAATTCTTGTCATGAAAGAT
GGTAACATCATTGAACAAGGTAGTCATGATGAATTGATGACAGAAGGTGGCTTCTATGCTGACCTTTACAATTCACAATT
TGAAGTAGCCTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(25-306)

ABC transporter (ABC_tran)

(370-516)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

73.142

100

0.734