Detailed information NTG0057737

Bioinformatically predicted

Overview

• Name: recJ
• Type: Machinery gene
• Locus tag: CCX78_RS03360
• Genome accession: NZ_AP017931
• Coordinates: 636786..639098 (+)
• Length: 770 a.a.
• NCBI ID: WP_096584666.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain LK-145
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 631786..644098

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CCX78_RS03335 (LASAK_00660)	-	632585..632980 (+)	396	WP_011374979.1	LPXTG cell wall anchor domain-containing protein	-
CCX78_RS03340 (LASAK_00661)	-	632970..634805 (+)	1836	WP_096584660.1	WxL domain-containing protein	-
CCX78_RS03345 (LASAK_00662)	-	634855..635181 (-)	327	WP_011374977.1	heavy metal-binding domain-containing protein	-
CCX78_RS03350 (LASAK_00663)	-	635198..635563 (-)	366	WP_011374976.1	DUF1304 domain-containing protein	-
CCX78_RS03355 (LASAK_00664)	galE	635649..636641 (-)	993	WP_096584663.1	UDP-glucose 4-epimerase GalE	-
CCX78_RS03360 (LASAK_00665)	recJ	636786..639098 (+)	2313	WP_096584666.1	single-stranded-DNA-specific exonuclease RecJ	Machinery gene
CCX78_RS03365 (LASAK_00666)	-	639122..639640 (+)	519	WP_096584669.1	adenine phosphoribosyltransferase	-
CCX78_RS03370 (LASAK_00667)	dinR/lexA	639733..640347 (-)	615	WP_011374972.1	transcriptional repressor LexA	Regulator
CCX78_RS03375 (LASAK_00668)	-	640482..640724 (+)	243	WP_016265356.1	DUF896 domain-containing protein	-
CCX78_RS03380 (LASAK_00669)	-	640805..641035 (+)	231	WP_011374970.1	YneF family protein	-
CCX78_RS03385 (LASAK_00670)	-	641177..642919 (+)	1743	WP_096584672.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 770 a.a.
• Molecular weight: 84911.80 Da
• Isoelectric Point: 4.5454

>NTDB_id=57737 CCX78_RS03360 WP_096584666.1 636786..639098(+) (recJ) [Latilactobacillus sakei strain LK-145]
MEAQYEWQLKPVPTEDELQTITKDNPLPKAAAQLLWQRGLRDAEQINDFMNPNVGQLHDPYALHDMQKAIDRIQEAIVNG
EKITIYGDYDADGITSTTLMKETLDDLGADVEVYVPNRFKDGYGPNLEAYKRLIENGTQLIVTVDNGVSGLEPIAYAQEH
GVDVVVTDHHELPAELPNAVAIVHPRHPEGQYPFGELCGVGVAFKVATALLEEIPYDKLDLAAIGTVCDIVPLVDENRTL
VSLGLQQLQNTDRPGLVALCQSAGLEQATLDATNIGFGIGPRLNAIGRLGDATLGVQLLTTLDDEEAVEQAQFIEQQNKK
RQGLVKEITEMAMTIAETPENQASATLVIAHEGWHEGVLGIVASHVVEQTGKPTLVLTIDPETGLAKGSGRSVTAFHLFK
ALDAHRELLVHFGGHHMAVGLTAKVDQLALIQTAMNEYAQVNQLDLTGRQPLPVDLALTLADITPDLYQALQQLAPFGSD
NPEPLIELSAPQLADVKQIGADQKHLKMMAVDQQQQLAVLAFNKGALMPDLTAAEDVKLVGSLSENTWRGQTTLQLMVKD
LATSGQVVLDQRSNRLTKQLFQSTGDYVFFNDKMREQLQSYLPAGSQALLATDEQVATSQELIVVDEPADLTAFEQFYQQ
QQAAKLSLIFYAKHSAYLEGMPTKQQFATFLVYLRKHPNIEKARLAELAAYLKLQLPLMIFMLQVFFDLGFVRIERGLIT
AELQPEKHALESAPSYQKRLAKIEMEKQLVYSTFTEVKDWLATLPAVANR

Nucleotide

• Length: 2313 bp

>NTDB_id=57737 CCX78_RS03360 WP_096584666.1 636786..639098(+) (recJ) [Latilactobacillus sakei strain LK-145]
TTGGAAGCACAATATGAATGGCAATTAAAACCAGTACCAACTGAAGATGAATTACAAACAATTACAAAAGACAATCCGCT
ACCTAAGGCTGCGGCCCAACTTTTGTGGCAACGTGGCTTGCGGGATGCAGAGCAGATCAATGATTTTATGAATCCCAATG
TCGGTCAACTTCACGATCCATACGCTTTGCATGATATGCAAAAGGCGATTGATCGGATTCAAGAAGCGATTGTGAATGGC
GAAAAAATTACGATTTATGGCGATTATGACGCGGACGGGATTACTAGTACGACTTTAATGAAGGAAACCTTAGATGACTT
AGGTGCCGATGTTGAAGTCTATGTGCCTAACCGTTTTAAGGATGGCTATGGGCCTAATTTAGAAGCTTACAAGCGCTTGA
TTGAAAATGGCACCCAATTAATTGTGACCGTTGATAACGGGGTGAGCGGCCTAGAACCAATCGCTTACGCGCAAGAACAC
GGTGTTGACGTGGTTGTGACCGATCACCATGAATTACCAGCAGAATTACCCAACGCAGTAGCGATTGTGCATCCTAGACA
TCCAGAGGGGCAATATCCTTTTGGCGAACTCTGTGGGGTCGGTGTGGCGTTTAAAGTGGCGACTGCTTTATTAGAAGAGA
TTCCTTACGATAAATTAGATTTAGCTGCAATCGGGACGGTTTGTGATATCGTCCCCTTAGTCGATGAAAATCGGACGTTG
GTTAGCTTAGGCTTACAACAATTACAAAATACCGATCGACCAGGTTTGGTCGCATTGTGTCAATCAGCTGGCTTAGAACA
AGCGACACTAGATGCTACTAACATTGGGTTTGGGATTGGTCCCCGTTTAAACGCAATTGGTCGTTTAGGTGATGCGACCC
TTGGTGTGCAATTGTTGACGACGCTTGATGACGAAGAAGCAGTCGAACAGGCCCAATTTATTGAACAACAAAATAAAAAA
CGCCAAGGTCTGGTAAAGGAAATTACGGAAATGGCAATGACAATTGCTGAAACACCGGAAAACCAAGCGAGTGCCACCTT
AGTTATTGCCCACGAAGGTTGGCATGAAGGGGTTCTAGGGATTGTGGCTAGTCATGTTGTTGAACAGACCGGTAAACCAA
CCTTAGTCTTGACGATTGACCCGGAAACTGGTTTAGCTAAAGGCTCTGGCCGTAGTGTGACAGCTTTCCATTTATTTAAA
GCGTTAGATGCCCACCGTGAATTATTGGTTCATTTTGGTGGCCATCACATGGCAGTTGGCTTGACTGCTAAGGTTGATCA
ATTAGCGCTGATTCAAACTGCAATGAACGAGTATGCGCAAGTTAATCAGTTAGATTTAACAGGACGCCAACCATTACCAG
TTGATTTGGCGCTGACGTTAGCTGATATTACGCCTGATTTATATCAAGCATTGCAACAACTGGCACCTTTTGGCAGTGAT
AATCCAGAACCGTTGATTGAACTTAGCGCGCCCCAGTTGGCCGATGTCAAACAAATCGGTGCTGATCAGAAGCATTTGAA
GATGATGGCGGTCGATCAACAACAACAATTAGCGGTTTTAGCTTTCAATAAAGGGGCTTTGATGCCCGATTTAACTGCCG
CTGAAGATGTGAAATTAGTCGGGAGTTTGAGTGAGAATACTTGGCGTGGCCAGACGACGTTGCAATTAATGGTAAAAGAC
CTTGCTACAAGTGGGCAAGTCGTACTTGATCAACGTAGCAATCGTCTGACGAAGCAATTATTCCAATCAACAGGCGACTA
CGTCTTTTTTAATGATAAAATGCGCGAGCAACTGCAGTCTTATTTACCGGCAGGGAGTCAGGCGCTGTTAGCGACCGATG
AACAAGTTGCTACTAGCCAAGAGCTAATTGTAGTTGATGAACCGGCTGATTTAACTGCTTTTGAACAATTTTATCAACAA
CAACAGGCCGCTAAATTAAGTTTAATTTTTTACGCCAAACACTCTGCTTACTTAGAAGGAATGCCGACAAAACAACAGTT
TGCGACTTTCTTAGTCTACTTGCGGAAACATCCAAATATTGAAAAAGCGCGGTTAGCAGAATTAGCAGCGTATTTAAAAT
TACAATTACCGTTAATGATTTTCATGTTGCAGGTGTTTTTTGACCTCGGATTTGTTAGAATAGAACGTGGTCTGATTACG
GCCGAGTTACAACCTGAAAAGCATGCACTGGAAAGTGCACCAAGTTATCAAAAACGATTAGCTAAAATTGAAATGGAAAA
ACAGCTTGTTTATTCAACCTTTACCGAGGTGAAAGACTGGCTAGCAACTCTCCCAGCAGTAGCAAATCGCTAA

Domains

Predicted by InterProScan.

• Single-strand DNA-specific exonuclease, C terminal domain (ssDNA-exonuc_C) (568-761)

• DHH family (DHH) (82-226)

• RecJ OB domain (RecJ_OB) (454-560)

• DHHA1 domain (DHHA1) (316-437)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recJ	Streptococcus pneumoniae strain D39V	40.604	98.831	0.401
recJ	Bacillus subtilis subsp. subtilis str. 168	37.371	100	0.377